RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 MARCH1Q8TCQ1 289 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 HYLS1Q96M11 299 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 RHPN1-AS1Q9BWJ2 59 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 IGHV7-4-1A0A0J9YVY3 117 aa12.04□□□□□ -0.48
SCLT1-204ENST00000503215 RAB3DO95716 219 aa12.04□□□□□ -0.48
SCLT1-204ENST00000503215 RPL35AP18077 110 aaKnown RBP12.04□□□□□ -0.48
SCLT1-204ENST00000503215 FCGR2BP31994 310 aaPredicted RBP12.04□□□□□ -0.48
SCLT1-204ENST00000503215 ERHP84090 104 aaKnown RBP12.04□□□□□ -0.48
SCLT1-204ENST00000503215 MLANAQ16655 118 aa12.04□□□□□ -0.48
SCLT1-204ENST00000503215 SCGB2B2Q4G0G5 96 aa12.04□□□□□ -0.48
SCLT1-204ENST00000503215 LAMTOR1Q6IAA8 161 aa12.04□□□□□ -0.48
SCLT1-204ENST00000503215 Q6ZRM9 215 aa12.04□□□□□ -0.48
SCLT1-204ENST00000503215 APRG1Q8IVJ8 170 aa12.04□□□□□ -0.48
SCLT1-204ENST00000503215 LILRB2Q8N423 598 aa12.04□□□□□ -0.48
SCLT1-204ENST00000503215 TMEM116Q8NCL8 245 aa12.04□□□□□ -0.48
SCLT1-204ENST00000503215 OR10C1Q96KK4 312 aa12.04□□□□□ -0.48
SCLT1-204ENST00000503215 MRPL36Q9P0J6 103 aaKnown RBP12.04□□□□□ -0.48
SCLT1-204ENST00000503215 IGKV3-7A0A075B6H7 116 aa12.03□□□□□ -0.48
SCLT1-204ENST00000503215 LINC00862A6NCI5 91 aa12.03□□□□□ -0.48
SCLT1-204ENST00000503215 APOHP02749 345 aaPredicted RBP12.03□□□□□ -0.48
SCLT1-204ENST00000503215 TFPI2P48307 235 aa12.03□□□□□ -0.48
SCLT1-204ENST00000503215 AKR1C2P52895 323 aa12.03□□□□□ -0.48
SCLT1-204ENST00000503215 RELQ04864 619 aaPredicted RBP12.03□□□□□ -0.48
SCLT1-204ENST00000503215 DEFB135Q30KP9 77 aa12.03□□□□□ -0.48
SCLT1-204ENST00000503215 STEAP1BQ6NZ63 245 aa12.03□□□□□ -0.48
SCLT1-204ENST00000503215 TXN2Q99757 166 aa12.03□□□□□ -0.48
SCLT1-204ENST00000503215 COPZ2Q9P299 210 aa12.03□□□□□ -0.48
SCLT1-204ENST00000503215 PRELID1Q9Y255 219 aa12.03□□□□□ -0.48
SCLT1-204ENST00000503215 RGS5O15539 181 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 GNG7O60262 68 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 IFNA17P01571 189 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 RNASE2P10153 161 aaKnown RBP12.02□□□□□ -0.49
SCLT1-204ENST00000503215 TBPP20226 339 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 UCP1P25874 307 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 HTR2BP41595 481 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 TAS2R19P59542 299 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 ZNF79Q15937 498 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 FAM90A2PQ658T7 463 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 PVRIGQ6DKI7 326 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 TOMM20LQ6UXN7 152 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 GBGT1Q8N5D6 347 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 LHFPL5Q8TAF8 219 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 ENKURQ8TC29 256 aa12.02□□□□□ -0.49
SCLT1-204ENST00000503215 RTBDNQ9BSG5 229 aaPredicted RBP12.02□□□□□ -0.49
SCLT1-204ENST00000503215 HYDINQ4G0P3 5121 aa12.01□□□□□ -0.49
SCLT1-204ENST00000503215 TRAV14DV4A0A0A6YYC5 116 aa12.01□□□□□ -0.49
SCLT1-204ENST00000503215 IGHV3-66A0A0C4DH42 116 aa12.01□□□□□ -0.49
SCLT1-204ENST00000503215 A0A0J9YWU9 116 aa12.01□□□□□ -0.49
SCLT1-204ENST00000503215 OR4C46A6NHA9 309 aa12.01□□□□□ -0.49
SCLT1-204ENST00000503215 GABARAPH6UMI1 98 aa12.01□□□□□ -0.49
SCLT1-204ENST00000503215 SLC35G3Q8N808 338 aa12.01□□□□□ -0.49
SCLT1-204ENST00000503215 IL17DQ8TAD2 202 aa12.01□□□□□ -0.49
SCLT1-204ENST00000503215 FNDC4Q9H6D8 234 aaPredicted RBP12.01□□□□□ -0.49
SCLT1-204ENST00000503215 A0A1B0GU03 582 aa12□□□□□ -0.49
SCLT1-204ENST00000503215 FABP12A6NFH5 140 aa12□□□□□ -0.49
SCLT1-204ENST00000503215 SPRY2O43597 315 aa12□□□□□ -0.49
SCLT1-204ENST00000503215 TMEM50AO95807 157 aa12□□□□□ -0.49
SCLT1-204ENST00000503215 OR5AC1P0C628 307 aa12□□□□□ -0.49
SCLT1-204ENST00000503215 SNCAP37840 140 aa12□□□□□ -0.49
SCLT1-204ENST00000503215 Q6ZWC4 215 aa12□□□□□ -0.49
SCLT1-204ENST00000503215 DEDD2Q8WXF8 326 aa12□□□□□ -0.49
SCLT1-204ENST00000503215 ST8SIA2Q92186 375 aa12□□□□□ -0.49
SCLT1-204ENST00000503215 MARVELD1Q9BSK0 173 aa12□□□□□ -0.49
SCLT1-204ENST00000503215 INS-IGF2F8WCM5 200 aa11.99□□□□□ -0.49
SCLT1-204ENST00000503215 APOC4P55056 127 aa11.99□□□□□ -0.49
SCLT1-204ENST00000503215 PLECQ15149 4684 aaKnown RBP11.99□□□□□ -0.49
SCLT1-204ENST00000503215 BAK1Q16611 211 aa11.99□□□□□ -0.49
SCLT1-204ENST00000503215 WFDC3Q8IUB2 231 aa11.99□□□□□ -0.49
SCLT1-204ENST00000503215 CCDC71LQ8N9Z2 235 aa11.99□□□□□ -0.49
SCLT1-204ENST00000503215 GLYATL2Q8WU03 294 aa11.99□□□□□ -0.49
SCLT1-204ENST00000503215 SOSTQ9BQB4 213 aa11.99□□□□□ -0.49
SCLT1-204ENST00000503215 ZFAND3Q9H8U3 227 aa11.99□□□□□ -0.49
SCLT1-204ENST00000503215 MAP6D1Q9H9H5 199 aa11.99□□□□□ -0.49
SCLT1-204ENST00000503215 PUS1Q9Y606 427 aaKnown RBP eCLIP11.99□□□□□ -0.49
SCLT1-204ENST00000503215 HOXA1P49639 335 aaPredicted RBP11.98□□□□□ -0.49
SCLT1-204ENST00000503215 RRAS2P62070 204 aaPredicted RBP11.98□□□□□ -0.49
SCLT1-204ENST00000503215 PMS2P11Q13670 270 aa11.98□□□□□ -0.49
SCLT1-204ENST00000503215 TCF24Q7RTU0 167 aa11.98□□□□□ -0.49
SCLT1-204ENST00000503215 LYG2Q86SG7 212 aa11.98□□□□□ -0.49
SCLT1-204ENST00000503215 SELENOHQ8IZQ5 122 aaKnown RBP11.98□□□□□ -0.49
SCLT1-204ENST00000503215 OR4C16Q8NGL9 310 aa11.98□□□□□ -0.49
SCLT1-204ENST00000503215 C15orf40Q8WUR7 153 aa11.98□□□□□ -0.49
SCLT1-204ENST00000503215 SMIM4Q8WVI0 70 aa11.98□□□□□ -0.49
SCLT1-204ENST00000503215 RNF183Q96D59 192 aa11.98□□□□□ -0.49
SCLT1-204ENST00000503215 RRNAD1Q96FB5 475 aaKnown RBP11.98□□□□□ -0.49
SCLT1-204ENST00000503215 TMEM222Q9H0R3 208 aa11.98□□□□□ -0.49
SCLT1-204ENST00000503215 PRR13Q9NZ81 148 aa11.98□□□□□ -0.49
SCLT1-204ENST00000503215 EPPK1P58107 5090 aaKnown RBP11.97□□□□□ -0.49
SCLT1-204ENST00000503215 KIR2DL5BA0A0G2JN68 375 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 KIR2DL5BA0A0G2JPC4 375 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 DFFBO76075 338 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 CDS2O95674 445 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 NPBWR1P48145 328 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 MEF2DQ14814 521 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 Q5BKY6 102 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 KIR2DL5AQ8N109 375 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 FAM24BQ8N5W8 94 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 STPG3Q8N7X2 389 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 KIR2DL5BQ8NHK3 375 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 RNASE11Q8TAA1 199 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms