RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 SERPINA6P08185 405 aa0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 CDC42P60953 191 aa0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 STX5Q13190 355 aa0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 LRRC25Q8N386 305 aaPredicted RBP0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 DNAJC9Q8WXX5 260 aa0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 SLC50A1Q9BRV3 221 aa0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 TMEM147Q9BVK8 224 aa0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 CYSLTR1Q9Y271 337 aa0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 PLB1Q6P1J6 1458 aa0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 EML6Q6ZMW3 1958 aa0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 SCN10AQ9Y5Y9 1956 aa0.65□□□□□ -2.31
CDC42SE2-204ENST00000502639 CCDC144AA2RUR9 1427 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 LOC110117498A0A087WWA1 95 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 A0A1B0GV50 99 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 C2orf70A6NJV1 201 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR5F1O95221 314 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 TTRP02766 147 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 HTR1AP08908 422 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 CD79AP11912 226 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 PSME3P61289 254 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 RPL22L1Q6P5R6 122 aaKnown RBP0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 C12orf45Q8N5I9 185 aaPredicted RBP0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR5A1Q8NGJ0 315 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR13C4Q8NGS5 318 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 TOMM6Q96B49 74 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR52E6Q96RD3 313 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 ULBP3Q9BZM4 244 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 UCK1Q9HA47 277 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 PRTFDC1Q9NRG1 225 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 UQCC1Q9NVA1 299 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 IDI2-AS1Q9NZ38 188 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 CKLFQ9UBR5 152 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 PRELID3BQ9Y3B1 194 aa0.64□□□□□ -2.31
CDC42SE2-204ENST00000502639 TRAV3A0A0B4J244 114 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 CRYZL1O95825 349 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 CDKN2CP42773 168 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 CDK10Q15131 360 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 RNASE10Q5GAN6 216 aaKnown RBP0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 SPANXN3Q5MJ09 141 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 SPOPLQ6IQ16 392 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 S100A7AQ86SG5 101 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 WFDC5Q8TCV5 224 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 PPP1R14BQ96C90 147 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 DCUN1D1Q96GG9 259 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 PRAP1Q96NZ9 151 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 SCGB3A1Q96QR1 104 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 DCSTAMPQ9H295 470 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR51V1Q9H2C8 321 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 TMEM56-RWDD3S4R434 201 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 DOCK3Q8IZD9 2030 aa0.63□□□□□ -2.31
CDC42SE2-204ENST00000502639 NUP155O75694 1391 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 TRAV9-1A0A075B6T8 112 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 hADV38S2A0JD32 116 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 PQLC2LA1A4F0 135 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR2T1O43869 369 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 RPP14O95059 124 aaKnown RBP0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 SMIM17P0DL12 118 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 SMIM10L2AP0DMW4 78 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 SMIM10L2BP0DMW5 78 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 SRIP30626 198 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 ZNF93P35789 620 aaPredicted RBP0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 PDE6HQ13956 83 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 C12orf74Q32Q52 190 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 MIR17HGQ75NE6 70 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 DEFB128Q7Z7B8 93 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 SIGLECL1Q8N7X8 197 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR4D11Q8NGI4 311 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 MCFD2Q8NI22 146 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 DGCR14Q96DF8 476 aaKnown RBP0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 ADAT3Q96EY9 351 aaPredicted RBP0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 GINS4Q9BRT9 223 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 ERGIC3Q9Y282 383 aa0.62□□□□□ -2.31
CDC42SE2-204ENST00000502639 ECM29Q5VYK3 1845 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 TNRC6AQ8NDV7 1962 aaKnown RBP0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 A0A087WX48 190 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 FUOMA2VDF0 154 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 ZNF682O95780 498 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 BRS3P32247 399 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 SSR2P43308 183 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 OMPP47874 163 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 SERPINB9P50453 376 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 ERVS71-1P61550 626 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 DEFB113Q30KQ7 82 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 LINC01554Q52M75 96 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 KHDC3LQ587J8 217 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 LINC00311Q8N616 119 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 COMMD5Q9GZQ3 224 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 ZFP30Q9Y2G7 519 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 LAMA4Q16363 1823 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 NEO1Q92859 1461 aa0.61□□□□□ -2.31
CDC42SE2-204ENST00000502639 CEP192Q8TEP8 1941 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 hCG_1818297A0A087WSY0 165 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 TRBV6-7A0A0A0MS04 114 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 A8MT66 165 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 C1orf196B1AJZ1 125 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 TMEM114B3SHH9 223 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 CLDN25C9JDP6 229 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 MGST1P10620 155 aaKnown RBP0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 MIFP14174 115 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms