RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 CTSGP08311 255 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 IAPPP10997 89 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 ADMP35318 185 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 NPBWR1P48145 328 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 MLANAQ16655 118 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 FAM106AQ4KMX7 169 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 REC114Q7Z4M0 266 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 CHRDL1Q9BU40 450 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 ZC4H2Q9NQZ6 224 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 GSKIPQ9P0R6 139 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 PEMTQ9UBM1 199 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 C5orf51A6NDU8 294 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 C15orf62A8K5M9 175 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 FAM25EA8MYX2 175 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 GNG7O60262 68 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 SAP30O75446 220 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
CPNE1-228ENST00000498814 RPP30P78346 268 aaKnown RBP11.87□□□□□ -0.51
CPNE1-228ENST00000498814 EGFEM1PQ0D2K5 195 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 ETFRF1Q6IPR1 90 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 GSG1LQ6UXU4 331 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 IL34Q6ZMJ4 242 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 OR4X1Q8NH49 305 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 C2orf50Q96LR7 162 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 ZNF436Q9C0F3 470 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-228ENST00000498814 MEGF8Q7Z7M0 2845 aa11.87□□□□□ -0.51
CPNE1-228ENST00000498814 C7orf66A4D0T2 115 aa11.86□□□□□ -0.51
CPNE1-228ENST00000498814 NUPL2O15504 423 aaKnown RBP11.86□□□□□ -0.51
CPNE1-228ENST00000498814 TMEM50AO95807 157 aa11.86□□□□□ -0.51
CPNE1-228ENST00000498814 SCGB1D2O95969 90 aa11.86□□□□□ -0.51
CPNE1-228ENST00000498814 MBPP02686 304 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-228ENST00000498814 IFNA4P05014 189 aa11.86□□□□□ -0.51
CPNE1-228ENST00000498814 SLC25A4P12235 298 aa11.86□□□□□ -0.51
CPNE1-228ENST00000498814 RAB11AP62491 216 aa11.86□□□□□ -0.51
CPNE1-228ENST00000498814 SMIM8Q96KF7 97 aa11.86□□□□□ -0.51
CPNE1-228ENST00000498814 SIGLEC8Q9NYZ4 499 aa11.86□□□□□ -0.51
CPNE1-228ENST00000498814 MRPL36Q9P0J6 103 aaKnown RBP11.86□□□□□ -0.51
CPNE1-228ENST00000498814 ZMAT5Q9UDW3 170 aaKnown RBP11.86□□□□□ -0.51
CPNE1-228ENST00000498814 SORL1Q92673 2214 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 A8MWP6 167 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 SSSCA1O60232 199 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 CLN5O75503 358 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 CSN3P07498 182 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 RELQ04864 619 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-228ENST00000498814 CD69Q07108 199 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 IL15RAQ13261 267 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 RGS21Q2M5E4 152 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 PRSS54Q6PEW0 395 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 TMEM116Q8NCL8 245 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 RAB40CQ96S21 281 aa11.85□□□□□ -0.51
CPNE1-228ENST00000498814 RCL1Q9Y2P8 373 aaKnown RBP11.85□□□□□ -0.51
CPNE1-228ENST00000498814 IGHV3-35A0A0C4DH35 117 aa11.84□□□□□ -0.51
CPNE1-228ENST00000498814 ZNF320A2RRD8 509 aa11.84□□□□□ -0.51
CPNE1-228ENST00000498814 NDUFA4O00483 81 aa11.84□□□□□ -0.51
CPNE1-228ENST00000498814 GPX4P36969 197 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-228ENST00000498814 ELLP55199 621 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-228ENST00000498814 PAX9P55771 341 aa11.84□□□□□ -0.51
CPNE1-228ENST00000498814 TAS2R30P59541 319 aa11.84□□□□□ -0.51
CPNE1-228ENST00000498814 SPANXN5Q5MJ07 72 aa11.84□□□□□ -0.51
CPNE1-228ENST00000498814 UNQ9165/PRO28630Q6UXU0 137 aa11.84□□□□□ -0.51
CPNE1-228ENST00000498814 CACNG8Q8WXS5 425 aa11.84□□□□□ -0.51
CPNE1-228ENST00000498814 ZNF414Q96IQ9 312 aa11.84□□□□□ -0.51
CPNE1-228ENST00000498814 PSENENQ9NZ42 101 aa11.84□□□□□ -0.51
CPNE1-228ENST00000498814 STRAPQ9Y3F4 350 aaKnown RBP11.84□□□□□ -0.51
CPNE1-228ENST00000498814 TRAV30A0A087WSZ9 112 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 C2orf70A6NJV1 201 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 GOSR2O14653 212 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 SSNA1O43805 119 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 SCGB2A1O75556 95 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 IGLV1-51P01701 117 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 RND2P52198 227 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 KRTAP10-11P60412 298 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 SLC16A13Q7RTY0 426 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 TMEM190Q8WZ59 177 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 UFC1Q9Y3C8 167 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 DNAH3Q8TD57 4116 aa11.83□□□□□ -0.52
CPNE1-228ENST00000498814 TMEM213A2RRL7 107 aa11.82□□□□□ -0.52
CPNE1-228ENST00000498814 PRSS46E5RG02 174 aa11.82□□□□□ -0.52
CPNE1-228ENST00000498814 H3BP45 60 aa11.82□□□□□ -0.52
CPNE1-228ENST00000498814 K7EPK0 472 aa11.82□□□□□ -0.52
CPNE1-228ENST00000498814 TSC22D2O75157 780 aa11.82□□□□□ -0.52
CPNE1-228ENST00000498814 FOLR2P14207 255 aa11.82□□□□□ -0.52
CPNE1-228ENST00000498814 DEFA6Q01524 100 aa11.82□□□□□ -0.52
CPNE1-228ENST00000498814 ADAMTSL5Q6ZMM2 481 aa11.82□□□□□ -0.52
CPNE1-228ENST00000498814 PAIP2BQ9ULR5 123 aaKnown RBP11.82□□□□□ -0.52
CPNE1-228ENST00000498814 ALG5Q9Y673 324 aa11.82□□□□□ -0.52
CPNE1-228ENST00000498814 K7EMT4 169 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 SIX6O95475 246 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 IGKV1-17P01599 117 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 IGLC1P0CG04 106 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 C8orf88P0DMB2 117 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 CBLN1P23435 193 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 CYCSP99999 105 aaKnown RBP11.81□□□□□ -0.52
CPNE1-228ENST00000498814 GAMTQ14353 236 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 OXA1LQ15070 435 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 TM4SF20Q53R12 229 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 TMEM14EPQ6UXP3 125 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 ZNF600Q6ZNG1 722 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 OR1S2Q8NGQ3 325 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms