RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 TWIST2Q8WVJ9 160 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 CYGBQ8WWM9 190 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 GNPNAT1Q96EK6 184 aaPredicted RBP0.55□□□□□ -2.32
TRBVA-201ENST00000498804 SMIM12Q96EX1 92 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 GPX7Q96SL4 187 aaPredicted RBP0.55□□□□□ -2.32
TRBVA-201ENST00000498804 PFDN5Q99471 154 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 SERPINI1Q99574 410 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 CCL13Q99616 98 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 C12orf57Q99622 126 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 CGREF1Q99674 301 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 C2orf88Q9BSF0 95 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 GGACTQ9BVM4 153 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 TRIM4Q9C037 500 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 OR2J1Q9GZK6 312 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 TMEM133Q9H2Q1 129 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 C11orf1Q9H5F2 150 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 CACYBPQ9HB71 228 aaKnown RBP0.55□□□□□ -2.32
TRBVA-201ENST00000498804 POPDC3Q9HBV1 291 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 KCNIP2Q9NS61 270 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 FBXL12Q9NXK8 326 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 COA4Q9NYJ1 87 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 DNAJC27Q9NZQ0 273 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 COMMD9Q9P000 198 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 DOK5Q9P104 306 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 LINC00527Q9UJ94 153 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 ANGPT4Q9Y264 503 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 LSM5Q9Y4Y9 91 aaKnown RBP0.55□□□□□ -2.32
TRBVA-201ENST00000498804 SHROOM2Q13796 1616 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 TRPM1Q7Z4N2 1603 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 COL4A5P29400 1685 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 TRPM6Q9BX84 2022 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 DCCP43146 1447 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 ARHGAP31Q2M1Z3 1444 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 FGD6Q6ZV73 1430 aa0.55□□□□□ -2.32
TRBVA-201ENST00000498804 PRG4Q92954 1404 aaPredicted RBP0.55□□□□□ -2.32
TRBVA-201ENST00000498804 NUP98P52948 1817 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 SLX4Q8IY92 1834 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 TCOF1Q13428 1488 aaKnown RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 MAGI1Q96QZ7 1491 aaPredicted RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 MYO5AQ9Y4I1 1855 aaKnown RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 ZCCHC11Q5TAX3 1644 aaKnown RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 USP54Q70EL1 1684 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 TRAV36DV7A0A075B6V5 113 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 hCG_1818297A0A087WSY0 165 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 IGHV1-45A0A0A0MS14 117 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 TEX50A0A1B0GTY4 177 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 DUXBA0A1W2PPF3 345 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 A6NED7 52 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 A8MT66 165 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 C1orf196B1AJZ1 125 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 B4DEV8 164 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 C9JAW5 83 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 F8W036 122 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 J3KT08 172 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 CYB5BO43169 146 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 OR2T1O43869 369 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 ORC5O43913 435 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 BANF1O75531 89 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 SERPINE1P05121 402 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 CD2P06729 351 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 SCGB1A1P11684 91 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 CD79AP11912 226 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 ZNF25P17030 456 aaPredicted RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 MYL12AP19105 171 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 OGNP20774 298 aaKnown RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 HLA-DMBP28068 263 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 S100A11P31949 105 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 GABRA3P34903 492 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 RAP1GDS1P52306 607 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 AQP4P55087 323 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 PIGPP57054 158 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 DAD1P61803 113 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 SUPT4H1P63272 117 aaKnown RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 RHOGP84095 191 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 MMDQ15546 238 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 GRK1Q15835 563 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 IAH1Q2TAA2 248 aaPredicted RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 MRPL51Q4U2R6 128 aaKnown RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 UBE2NLQ5JXB2 153 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 NOXRED1Q6NXP6 359 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 SOSTDC1Q6X4U4 206 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 SCGB1D4Q6XE38 83 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 Q6ZS49 121 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 C2orf91Q6ZV80 131 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 ZNF767PQ75MW2 155 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 SSX8Q7RTT4 187 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 TRAPPC6BQ86SZ2 158 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 STX19Q8N4C7 294 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 TSTD1Q8NFU3 115 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 OR11H6Q8NGC7 330 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 OR8A1Q8NGG7 326 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 OR4D11Q8NGI4 311 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 OR13C6PQ8NH95 151 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 CLDND2Q8NHS1 167 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 C2orf15Q8WU43 125 aaKnown RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 CT55Q8WUE5 264 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 DYDC1Q8WWB3 177 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 H1FXQ92522 213 aaKnown RBP0.54□□□□□ -2.32
TRBVA-201ENST00000498804 SLAMF6Q96DU3 332 aa0.54□□□□□ -2.32
TRBVA-201ENST00000498804 BTF3L4Q96K17 158 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms