RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 CTSGP08311 255 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 ADMP35318 185 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 NPBWR1P48145 328 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 MLANAQ16655 118 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 IAH1Q2TAA2 248 aaPredicted RBP12.76□□□□□ -0.37
PRKCB-210ENST00000498739 UNQ9165/PRO28630Q6UXU0 137 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 OR4D5Q8NGN0 318 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 RNASEH2CQ8TDP1 164 aaKnown RBP12.76□□□□□ -0.37
PRKCB-210ENST00000498739 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 ZNF436Q9C0F3 470 aaPredicted RBP12.76□□□□□ -0.37
PRKCB-210ENST00000498739 C2orf70A6NJV1 201 aa12.75□□□□□ -0.37
PRKCB-210ENST00000498739 INMT-MINDY4F8WBC2 141 aa12.75□□□□□ -0.37
PRKCB-210ENST00000498739 WRBO00258 174 aa12.75□□□□□ -0.37
PRKCB-210ENST00000498739 LY86O95711 162 aa12.75□□□□□ -0.37
PRKCB-210ENST00000498739 SCGB1D2O95969 90 aa12.75□□□□□ -0.37
PRKCB-210ENST00000498739 IGLV1-51P01701 117 aa12.75□□□□□ -0.37
PRKCB-210ENST00000498739 EDN2P20800 178 aa12.75□□□□□ -0.37
PRKCB-210ENST00000498739 NKX2-1P43699 371 aaPredicted RBP12.75□□□□□ -0.37
PRKCB-210ENST00000498739 CIB3Q96Q77 187 aaPredicted RBP12.75□□□□□ -0.37
PRKCB-210ENST00000498739 GPN1Q9HCN4 374 aaPredicted RBP12.75□□□□□ -0.37
PRKCB-210ENST00000498739 SIGLEC8Q9NYZ4 499 aa12.75□□□□□ -0.37
PRKCB-210ENST00000498739 GSKIPQ9P0R6 139 aa12.75□□□□□ -0.37
PRKCB-210ENST00000498739 ZNF256Q9Y2P7 627 aaPredicted RBP12.75□□□□□ -0.37
PRKCB-210ENST00000498739 WI2-2373I1.2A0A1W2PRP0 233 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 A8MWP6 167 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 FAM25EA8MYX2 175 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 NDUFA4O00483 81 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 IFNA4P05014 189 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 POLR2GP62487 172 aaKnown RBP eCLIP12.74□□□□□ -0.37
PRKCB-210ENST00000498739 ID3Q02535 119 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 RELQ04864 619 aaPredicted RBP12.74□□□□□ -0.37
PRKCB-210ENST00000498739 ZBTB8BQ8NAP8 495 aaPredicted RBP12.74□□□□□ -0.37
PRKCB-210ENST00000498739 MRAPQ8TCY5 172 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 DYNLRB2Q8TF09 96 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 CACNG8Q8WXS5 425 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 TMEM190Q8WZ59 177 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 PRR25Q96S07 402 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 PALMDQ9NP74 551 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 MRPL36Q9P0J6 103 aaKnown RBP12.74□□□□□ -0.37
PRKCB-210ENST00000498739 PAIP2BQ9ULR5 123 aaKnown RBP12.74□□□□□ -0.37
PRKCB-210ENST00000498739 UFC1Q9Y3C8 167 aa12.74□□□□□ -0.37
PRKCB-210ENST00000498739 TMEM213A2RRL7 107 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 PRAF2O60831 178 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 CLN5O75503 358 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 TMEM50AO95807 157 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 SLC25A4P12235 298 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 FOLR2P14207 255 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 SPNP16150 400 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 ATP5IP56385 69 aaPredicted RBP12.73□□□□□ -0.37
PRKCB-210ENST00000498739 RAB11AP62491 216 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 TM4SF20Q53R12 229 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 ETFRF1Q6IPR1 90 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 ADAMTSL5Q6ZMM2 481 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 OR4X1Q8NH49 305 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 MARVELD1Q9BSK0 173 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 C20orf24Q9BUV8 137 aa12.73□□□□□ -0.37
PRKCB-210ENST00000498739 IGHV3OR16-8A0A075B7F1 116 aa12.72□□□□□ -0.37
PRKCB-210ENST00000498739 C5orf51A6NDU8 294 aa12.72□□□□□ -0.37
PRKCB-210ENST00000498739 C15orf62A8K5M9 175 aa12.72□□□□□ -0.37
PRKCB-210ENST00000498739 K7EIL1 84 aa12.72□□□□□ -0.37
PRKCB-210ENST00000498739 SSSCA1O60232 199 aa12.72□□□□□ -0.37
PRKCB-210ENST00000498739 SCGB2A1O75556 95 aa12.72□□□□□ -0.37
PRKCB-210ENST00000498739 YIF1AO95070 293 aa12.72□□□□□ -0.37
PRKCB-210ENST00000498739 CBLN1P23435 193 aa12.72□□□□□ -0.37
PRKCB-210ENST00000498739 RPP30P78346 268 aaKnown RBP12.72□□□□□ -0.37
PRKCB-210ENST00000498739 NOTCH1P46531 2555 aa12.72□□□□□ -0.37
PRKCB-210ENST00000498739 NOTCH3Q9UM47 2321 aa12.71□□□□□ -0.37
PRKCB-210ENST00000498739 H3BP45 60 aa12.71□□□□□ -0.37
PRKCB-210ENST00000498739 RND2P52198 227 aa12.71□□□□□ -0.37
PRKCB-210ENST00000498739 ELLP55199 621 aaPredicted RBP12.71□□□□□ -0.37
PRKCB-210ENST00000498739 CD69Q07108 199 aa12.71□□□□□ -0.37
PRKCB-210ENST00000498739 SPANXN5Q5MJ07 72 aa12.71□□□□□ -0.37
PRKCB-210ENST00000498739 PRSS54Q6PEW0 395 aa12.71□□□□□ -0.37
PRKCB-210ENST00000498739 SLC16A13Q7RTY0 426 aa12.71□□□□□ -0.37
PRKCB-210ENST00000498739 ACY3Q96HD9 319 aa12.71□□□□□ -0.37
PRKCB-210ENST00000498739 ZNF414Q96IQ9 312 aa12.71□□□□□ -0.37
PRKCB-210ENST00000498739 SNRPGP15A8MWD9 76 aa12.7□□□□□ -0.38
PRKCB-210ENST00000498739 ZNF207O43670 478 aaKnown RBP12.7□□□□□ -0.38
PRKCB-210ENST00000498739 GP9P14770 177 aa12.7□□□□□ -0.38
PRKCB-210ENST00000498739 LCN12Q6JVE5 192 aa12.7□□□□□ -0.38
PRKCB-210ENST00000498739 GSG1LQ6UXU4 331 aa12.7□□□□□ -0.38
PRKCB-210ENST00000498739 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
PRKCB-210ENST00000498739 OR2K2Q8NGT1 345 aa12.7□□□□□ -0.38
PRKCB-210ENST00000498739 MARC2Q969Z3 335 aa12.7□□□□□ -0.38
PRKCB-210ENST00000498739 DAZ1Q9NQZ3 744 aaKnown RBP12.7□□□□□ -0.38
PRKCB-210ENST00000498739 PSENENQ9NZ42 101 aa12.7□□□□□ -0.38
PRKCB-210ENST00000498739 MRPL27Q9P0M9 148 aaKnown RBP12.7□□□□□ -0.38
PRKCB-210ENST00000498739 STRAPQ9Y3F4 350 aaKnown RBP12.7□□□□□ -0.38
PRKCB-210ENST00000498739 SELENOKQ9Y6D0 94 aa12.7□□□□□ -0.38
PRKCB-210ENST00000498739 DNAH3Q8TD57 4116 aa12.7□□□□□ -0.38
PRKCB-210ENST00000498739 TRAV30A0A087WSZ9 112 aa12.69□□□□□ -0.38
PRKCB-210ENST00000498739 PTTG1O95997 202 aa12.69□□□□□ -0.38
PRKCB-210ENST00000498739 MBPP02686 304 aaPredicted RBP12.69□□□□□ -0.38
PRKCB-210ENST00000498739 DEFB114Q30KQ6 69 aa12.69□□□□□ -0.38
PRKCB-210ENST00000498739 TIGITQ495A1 244 aa12.69□□□□□ -0.38
PRKCB-210ENST00000498739 CD300EQ496F6 205 aaPredicted RBP12.69□□□□□ -0.38
PRKCB-210ENST00000498739 DEFB121Q5J5C9 76 aa12.69□□□□□ -0.38
PRKCB-210ENST00000498739 BTNL8Q6UX41 500 aa12.69□□□□□ -0.38
PRKCB-210ENST00000498739 TMEM116Q8NCL8 245 aa12.69□□□□□ -0.38
PRKCB-210ENST00000498739 NPIPB3Q92617 1050 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 271.8 ms