RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SSBP4Q9BWG4 385 aaPredicted RBP4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 PROK2Q9HC23 129 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 HES4Q9HCC6 221 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 SLC39A9Q9NUM3 307 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 AKAP6Q13023 2319 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 LOC102725191A0A1B0GVB3 256 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 SLC22A20A6NK97 555 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 LINC01548A6NM66 108 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 B5MCH6 92 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 M0R135 149 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 RRHO14718 337 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 NEURL1O76050 574 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF883P0CG24 379 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 FCGR2AP12318 317 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF32P17041 273 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 PPIFP30405 207 aaKnown RBP4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TIMP3P35625 211 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TMPRSS3P57727 454 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TAS2R46P59540 309 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 ID3Q02535 119 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 KLHDC1Q8N7A1 406 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 LRTM2Q8N967 370 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 GJC3Q8NFK1 279 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 SLC25A40Q8TBP6 338 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF799Q96GE5 643 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 SCGB3A2Q96PL1 93 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 FAM173AQ9BQD7 235 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 SFXN3Q9BWM7 321 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 RNASE7Q9H1E1 156 aaKnown RBP4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 NAT8BQ9UHF3 227 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 MAST4O15021 2626 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 A0A087WWL8 130 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 TM4SF5O14894 197 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 RBMXL2O75526 392 aaKnown RBP4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 PRB1P04280 392 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 ISG15P05161 165 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 NPBWR2P48146 333 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 TMEM249Q2WGJ8 235 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 PIGYQ3MUY2 71 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 NMSQ5H8A3 153 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 TMEM136Q6ZRR5 245 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 FAM168AQ92567 244 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR8B2Q96RD0 313 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 C20orf78Q9BR46 151 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 TTTY12Q9BZ98 90 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 PIGLQ9Y2B2 252 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 POLQO75417 2590 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 CADP27708 2225 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 SVEP1Q4LDE5 3571 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR4C46A6NHA9 309 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 K7EP34 96 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 CD5LO43866 347 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 NRASP01111 189 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 ADH4P08319 380 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 FOXG1P55316 489 aaPredicted RBP4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 RPL8P62917 257 aaKnown RBP4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 SPTSSAQ969W0 71 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 SPAG8Q99932 426 aaPredicted RBP4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 PCSK5Q92824 1860 aa4.77□□□□□ -1.65
SOX2-OT-218ENST00000498731 C17orf100A8MU93 164 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 K7ERJ3 54 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 HSPB6O14558 160 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 MPPED1O15442 326 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 MT-ATP8P03928 68 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 LINC00869P0C866 280 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 ZNF138P52744 262 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 RAB31Q13636 194 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 DAZAP2Q15038 168 aaPredicted RBP4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 KISS1Q15726 138 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 SPINK9Q5DT21 86 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 LRRC75A-AS1Q8N1F1 130 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 GAPTQ8N292 157 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 ZNF611Q8N823 705 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 ZNF439Q8NDP4 499 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 FDCSPQ8NFU4 85 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR8B3Q8NGG8 313 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR5B3Q8NH48 314 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 C18orf32Q8TCD1 76 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 ARPC1AQ92747 370 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 LYZL4Q96KX0 146 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 FOXB1Q99853 325 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 TMEM222Q9H0R3 208 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 SLC7A10Q9NS82 523 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 TIMM8BQ9Y5J9 83 aaPredicted RBP4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 UTP20O75691 2785 aaKnown RBP4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 SPG11Q96JI7 2443 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 C21orf140B9A014 251 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 SP1P08047 785 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 FCGR2BP31994 310 aaPredicted RBP4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 PSMB3P49720 205 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 TBR1Q16650 682 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 LTC4SQ16873 150 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 SLC25A47Q6Q0C1 308 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 C3orf56Q8N813 242 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 OR2T6Q8NHC8 308 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 MBD6Q96DN6 1003 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 SCRT2Q9NQ03 307 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 KLF13Q9Y2Y9 288 aaPredicted RBP4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 HCFC1P51610 2035 aa4.76□□□□□ -1.65
SOX2-OT-218ENST00000498731 TRGV5A0A0B4J1U4 118 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms