RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TFPI2P48307 235 aa11.99□□□□□ -0.49
NR1H3-227ENST00000498548 SUB1P53999 127 aaKnown RBP eCLIP11.99□□□□□ -0.49
NR1H3-227ENST00000498548 PVRIGQ6DKI7 326 aa11.99□□□□□ -0.49
NR1H3-227ENST00000498548 TOMM20LQ6UXN7 152 aa11.99□□□□□ -0.49
NR1H3-227ENST00000498548 GGTLC1Q9BX51 225 aa11.99□□□□□ -0.49
NR1H3-227ENST00000498548 FNDC4Q9H6D8 234 aaPredicted RBP11.99□□□□□ -0.49
NR1H3-227ENST00000498548 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.99□□□□□ -0.49
NR1H3-227ENST00000498548 SCP2D1Q9UJQ7 156 aa11.99□□□□□ -0.49
NR1H3-227ENST00000498548 STARD9Q9P2P6 4700 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 TRAV14DV4A0A0A6YYC5 116 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 IGHV3-66A0A0C4DH42 116 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 APOHP02749 345 aaPredicted RBP11.98□□□□□ -0.49
NR1H3-227ENST00000498548 AKR1C4P17516 323 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 NPBWR1P48145 328 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 SPCS3P61009 180 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 TMEM187Q14656 261 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 PYDC2Q56P42 97 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 FAM219AQ8IW50 185 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 OR10C1Q96KK4 312 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 NBEAL2Q6ZNJ1 2754 aa11.98□□□□□ -0.49
NR1H3-227ENST00000498548 OPRK1P41145 380 aa11.97□□□□□ -0.49
NR1H3-227ENST00000498548 ZNF124Q15973 351 aa11.97□□□□□ -0.49
NR1H3-227ENST00000498548 ODF3L2Q3SX64 289 aa11.97□□□□□ -0.49
NR1H3-227ENST00000498548 LILRB2Q8N423 598 aa11.97□□□□□ -0.49
NR1H3-227ENST00000498548 GBGT1Q8N5D6 347 aa11.97□□□□□ -0.49
NR1H3-227ENST00000498548 HEYLQ9NQ87 328 aaPredicted RBP11.97□□□□□ -0.49
NR1H3-227ENST00000498548 KCNIP3Q9Y2W7 256 aa11.97□□□□□ -0.49
NR1H3-227ENST00000498548 PUS1Q9Y606 427 aaKnown RBP eCLIP11.97□□□□□ -0.49
NR1H3-227ENST00000498548 TMEM56-RWDD3S4R434 201 aa11.97□□□□□ -0.49
NR1H3-227ENST00000498548 A0A1B0GU03 582 aa11.96□□□□□ -0.49
NR1H3-227ENST00000498548 CEBPZOSA8MTT3 80 aa11.96□□□□□ -0.49
NR1H3-227ENST00000498548 RPL35AP18077 110 aaKnown RBP11.96□□□□□ -0.49
NR1H3-227ENST00000498548 KLF9Q13886 244 aaPredicted RBP11.96□□□□□ -0.49
NR1H3-227ENST00000498548 BSXQ3C1V8 233 aa11.96□□□□□ -0.49
NR1H3-227ENST00000498548 ZNF600Q6ZNG1 722 aa11.96□□□□□ -0.49
NR1H3-227ENST00000498548 WFDC3Q8IUB2 231 aa11.96□□□□□ -0.49
NR1H3-227ENST00000498548 APRG1Q8IVJ8 170 aa11.96□□□□□ -0.49
NR1H3-227ENST00000498548 OR52E5Q8NH55 327 aa11.96□□□□□ -0.49
NR1H3-227ENST00000498548 ST8SIA2Q92186 375 aa11.96□□□□□ -0.49
NR1H3-227ENST00000498548 OVOL2Q9BRP0 275 aa11.96□□□□□ -0.49
NR1H3-227ENST00000498548 V9GYH0 126 aa11.96□□□□□ -0.49
NR1H3-227ENST00000498548 OR4C46A6NHA9 309 aa11.95□□□□□ -0.5
NR1H3-227ENST00000498548 CORTO00230 105 aa11.95□□□□□ -0.5
NR1H3-227ENST00000498548 SUPT4H1P63272 117 aaKnown RBP11.95□□□□□ -0.5
NR1H3-227ENST00000498548 TIGITQ495A1 244 aa11.95□□□□□ -0.5
NR1H3-227ENST00000498548 AARDQ4LEZ3 155 aa11.95□□□□□ -0.5
NR1H3-227ENST00000498548 FAM90A2PQ658T7 463 aa11.95□□□□□ -0.5
NR1H3-227ENST00000498548 TCF24Q7RTU0 167 aa11.95□□□□□ -0.5
NR1H3-227ENST00000498548 LYZL2Q7Z4W2 148 aa11.95□□□□□ -0.5
NR1H3-227ENST00000498548 GALNT14Q96FL9 552 aa11.95□□□□□ -0.5
NR1H3-227ENST00000498548 SCGB3A2Q96PL1 93 aa11.95□□□□□ -0.5
NR1H3-227ENST00000498548 ZFAND3Q9H8U3 227 aa11.95□□□□□ -0.5
NR1H3-227ENST00000498548 SACSQ9NZJ4 4579 aa11.94□□□□□ -0.5
NR1H3-227ENST00000498548 CLN5O75503 358 aa11.94□□□□□ -0.5
NR1H3-227ENST00000498548 HTR2BP41595 481 aa11.94□□□□□ -0.5
NR1H3-227ENST00000498548 ZNF79Q15937 498 aa11.94□□□□□ -0.5
NR1H3-227ENST00000498548 TOMM5Q8N4H5 51 aa11.94□□□□□ -0.5
NR1H3-227ENST00000498548 OR4X1Q8NH49 305 aa11.94□□□□□ -0.5
NR1H3-227ENST00000498548 TMEM170AQ8WVE7 144 aa11.94□□□□□ -0.5
NR1H3-227ENST00000498548 TRIM63Q969Q1 353 aa11.94□□□□□ -0.5
NR1H3-227ENST00000498548 GINS3Q9BRX5 216 aa11.94□□□□□ -0.5
NR1H3-227ENST00000498548 CSMD3Q7Z407 3707 aa11.94□□□□□ -0.5
NR1H3-227ENST00000498548 DFFBO76075 338 aa11.93□□□□□ -0.5
NR1H3-227ENST00000498548 SULT1A3P0DMM9 295 aa11.93□□□□□ -0.5
NR1H3-227ENST00000498548 SULT1A4P0DMN0 295 aa11.93□□□□□ -0.5
NR1H3-227ENST00000498548 S100A5P33763 92 aa11.93□□□□□ -0.5
NR1H3-227ENST00000498548 TMED4Q7Z7H5 227 aa11.93□□□□□ -0.5
NR1H3-227ENST00000498548 IL22RA2Q969J5 263 aa11.93□□□□□ -0.5
NR1H3-227ENST00000498548 FAUP35544 74 aaKnown RBP11.92□□□□□ -0.5
NR1H3-227ENST00000498548 C2orf83Q53S99 150 aa11.92□□□□□ -0.5
NR1H3-227ENST00000498548 CCDC190Q86UF4 302 aa11.92□□□□□ -0.5
NR1H3-227ENST00000498548 SLC24A4Q8NFF2 622 aa11.92□□□□□ -0.5
NR1H3-227ENST00000498548 RBKSQ9H477 322 aa11.92□□□□□ -0.5
NR1H3-227ENST00000498548 VSIRQ9H7M9 311 aa11.92□□□□□ -0.5
NR1H3-227ENST00000498548 RPS10-NUDT3A0A1W2PQS6 291 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 IGKV1-17P01599 117 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 NPPCP23582 126 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 RND2P52198 227 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 APOC4P55056 127 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 RPL11P62913 178 aaKnown RBP11.91□□□□□ -0.5
NR1H3-227ENST00000498548 SMCO1Q147U7 214 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 DEFB135Q30KP9 77 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 NMSQ5H8A3 153 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 PRSS54Q6PEW0 395 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 LINC00299Q6ZSB3 139 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 LGI3Q8N145 548 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 MAP6D1Q9H9H5 199 aa11.91□□□□□ -0.5
NR1H3-227ENST00000498548 A0A0B4J2A0 478 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 DNASE2O00115 360 aaPredicted RBP11.9□□□□□ -0.5
NR1H3-227ENST00000498548 SPRY2O43597 315 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 ANXA3P12429 323 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 NPY1RP25929 384 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 CCR6P51684 374 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 AP3S2P59780 193 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 PAFAH1B2P68402 229 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 TNFRSF9Q07011 255 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 RBMS2Q15434 407 aaKnown RBP11.9□□□□□ -0.5
NR1H3-227ENST00000498548 FAM24BQ8N5W8 94 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 LYSTQ99698 3801 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 MS4A6AQ9H2W1 248 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms