RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 MTFP1Q9UDX5 166 aa8.68□□□□□ -1.02
NUDCD3-211ENST00000497978 A0A0B4J293 547 aa8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 PPP5CP53041 499 aa8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 TAS2R19P59542 299 aa8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 RPL11P62913 178 aaKnown RBP8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 EWSR1Q01844 656 aaKnown RBP eCLIP8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 SCGB2B2Q4G0G5 96 aa8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 FAM90A2PQ658T7 463 aa8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 TMEM229BQ8NBD8 167 aa8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 TERB2Q8NHR7 220 aa8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 ST8SIA2Q92186 375 aa8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 VSIRQ9H7M9 311 aa8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 PUS1Q9Y606 427 aaKnown RBP eCLIP8.67□□□□□ -1.02
NUDCD3-211ENST00000497978 A0A1W2PS18 150 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 DFFBO76075 338 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 GABARAPO95166 117 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 RAB3DO95716 219 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 TMEM50AO95807 157 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 P0C879 139 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 NPPCP23582 126 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 OPRK1P41145 380 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 ETV6P41212 452 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 ZNF124Q15973 351 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 CTF1Q16619 201 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 SP6Q3SY56 376 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 OR13C8Q8NGS7 320 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 ABHD1Q96SE0 405 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 RARRES2Q99969 163 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 NAA50Q9GZZ1 169 aaKnown RBP8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 MS4A6AQ9H2W1 248 aa8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 C14orf166Q9Y224 244 aaKnown RBP8.66□□□□□ -1.02
NUDCD3-211ENST00000497978 TRAV2A0A0B4J234 112 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 RGS5O15539 181 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 CD74P04233 296 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 RNASE2P10153 161 aaKnown RBP8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 UCP1P25874 307 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 SSBP1Q04837 148 aaKnown RBP8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 GPR107Q5VW38 600 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 PVRIGQ6DKI7 326 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 STEAP1BQ6NZ63 245 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 FAM219AQ8IW50 185 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 OR4D10Q8NGI6 311 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 MARCH1Q8TCQ1 289 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 NARS2Q96I59 477 aaKnown RBP8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 METTL26Q96S19 204 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 RABAC1Q9UI14 185 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 DNAH1Q9P2D7 4330 aa8.65□□□□□ -1.02
NUDCD3-211ENST00000497978 HYDINQ4G0P3 5121 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 TRAV30A0A087WSZ9 112 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 IGHV3-66A0A0C4DH42 116 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 TEX13DA0A0J9YY54 714 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 RPS10-NUDT3A0A1W2PQS6 291 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 GABARAPH6UMI1 98 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 CLN5O75503 358 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 CA1P00915 261 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 APOHP02749 345 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 RPL5P46777 297 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 DEFB131AP59861 70 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 SPCS3P61009 180 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 MRPS10P82664 201 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 MEF2DQ14814 521 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 OR11H2Q8NH07 326 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 OR4X1Q8NH49 305 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 PHLDA1Q8WV24 401 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 TMEM230Q96A57 120 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 MFFQ9GZY8 342 aa8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-211ENST00000497978 A0A1B0GU03 582 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 DISC1C4P0D8 188 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 CDS2O95674 445 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 HTR2BP41595 481 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 DHODHQ02127 395 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 TMEM187Q14656 261 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 SURF2Q15527 256 aaPredicted RBP8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 LEMD1Q68G75 181 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 STHQ8IWL8 128 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 LILRB2Q8N423 598 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 OR52E5Q8NH55 327 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 C11orf45Q8TAV5 145 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 GRAMD2BQ96HH9 432 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 TMEM222Q9H0R3 208 aa8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 C11orf68Q9H3H3 251 aaKnown RBP8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 HEYLQ9NQ87 328 aaPredicted RBP8.63□□□□□ -1.03
NUDCD3-211ENST00000497978 PLECQ15149 4684 aaKnown RBP8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 A0A0G2JRQ6 117 aa8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 IFNA4P05014 189 aa8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 OR5AC1P0C628 307 aa8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 SMIM18P0DKX4 95 aa8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 CRYBB3P26998 211 aa8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 EIF2B2P49770 351 aaKnown RBP8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 RBMS2Q15434 407 aaKnown RBP8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 MLANAQ16655 118 aa8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 GPR141Q7Z602 305 aa8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 STXBP6Q8NFX7 210 aa8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 RBPMSQ93062 196 aaKnown RBP8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 FNDC4Q9H6D8 234 aaPredicted RBP8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 NAA60Q9H7X0 242 aa8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 RABL2AQ9UBK7 228 aaPredicted RBP8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 CACFD1Q9UGQ2 172 aa8.62□□□□□ -1.03
NUDCD3-211ENST00000497978 RABL2BQ9UNT1 228 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 226.6 ms