RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 CSN3P07498 182 aa7.94□□□□□ -1.14
PTPRN-218ENST00000497977 FOLR2P14207 255 aa7.94□□□□□ -1.14
PTPRN-218ENST00000497977 CBLN1P23435 193 aa7.94□□□□□ -1.14
PTPRN-218ENST00000497977 FCGR2BP31994 310 aaPredicted RBP7.94□□□□□ -1.14
PTPRN-218ENST00000497977 GPR183P32249 361 aa7.94□□□□□ -1.14
PTPRN-218ENST00000497977 CMC4P56277 68 aaPredicted RBP7.94□□□□□ -1.14
PTPRN-218ENST00000497977 OXA1LQ15070 435 aa7.94□□□□□ -1.14
PTPRN-218ENST00000497977 Q6ZRM9 215 aa7.94□□□□□ -1.14
PTPRN-218ENST00000497977 LRTM2Q8N967 370 aa7.94□□□□□ -1.14
PTPRN-218ENST00000497977 PINX1Q96BK5 328 aaKnown RBP7.94□□□□□ -1.14
PTPRN-218ENST00000497977 B9D2Q9BPU9 175 aa7.94□□□□□ -1.14
PTPRN-218ENST00000497977 TUBA4BQ9H853 241 aa7.94□□□□□ -1.14
PTPRN-218ENST00000497977 CMYA5Q8N3K9 4069 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 TRAV25A0A0B4J276 109 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 OR2T8A6NH00 312 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 PPP5D1E7EU14 171 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 YIF1AO95070 293 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 SIX6O95475 246 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 IGHV3-23P01764 117 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 IAPPP10997 89 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 SLC25A4P12235 298 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 SLC25A6P12236 298 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 S100A10P60903 97 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 IAH1Q2TAA2 248 aaPredicted RBP7.93□□□□□ -1.14
PTPRN-218ENST00000497977 AARDQ4LEZ3 155 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 SLC16A13Q7RTY0 426 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 RNASEH2CQ8TDP1 164 aaKnown RBP7.93□□□□□ -1.14
PTPRN-218ENST00000497977 NARS2Q96I59 477 aaKnown RBP7.93□□□□□ -1.14
PTPRN-218ENST00000497977 OR10C1Q96KK4 312 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 CIB3Q96Q77 187 aaPredicted RBP7.93□□□□□ -1.14
PTPRN-218ENST00000497977 PRR25Q96S07 402 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 GINS3Q9BRX5 216 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 MAGT1Q9H0U3 335 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 GSKIPQ9P0R6 139 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 MGAT4CQ9UBM8 478 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 PFDN2Q9UHV9 154 aa7.93□□□□□ -1.14
PTPRN-218ENST00000497977 hCG_2014768A0A024R1R8 64 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 C7orf66A4D0T2 115 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 C2orf70A6NJV1 201 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 C15orf62A8K5M9 175 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 SNRPGP15A8MWD9 76 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 FAM90A26D6RGX4 464 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 WRBO00258 174 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 SSSCA1O60232 199 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 MT-CO2P00403 227 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 IFNA10P01566 189 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 TRBV12-3P01733 135 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 OPRK1P41145 380 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 RAB11AP62491 216 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 PAFAH1B2P68402 229 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 DEFB114Q30KQ6 69 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 GSG1LQ6UXU4 331 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 ZBTB8BQ8NAP8 495 aaPredicted RBP7.92□□□□□ -1.14
PTPRN-218ENST00000497977 CCDC140Q96MF4 163 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 RBKSQ9H477 322 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 ZMAT4Q9H898 229 aa7.92□□□□□ -1.14
PTPRN-218ENST00000497977 DAZ1Q9NQZ3 744 aaKnown RBP7.92□□□□□ -1.14
PTPRN-218ENST00000497977 PAIP2BQ9ULR5 123 aaKnown RBP7.92□□□□□ -1.14
PTPRN-218ENST00000497977 LSM4Q9Y4Z0 139 aaKnown RBP7.92□□□□□ -1.14
PTPRN-218ENST00000497977 TRAV14DV4A0A0A6YYC5 116 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 A0A1W2PS18 150 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 MFSD2BA6NFX1 497 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 A8MWP6 167 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 H3BP45 60 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 I3L2K1 104 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 FABP1P07148 127 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 S100A7P31151 101 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 TNFRSF9Q07011 255 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 GUCA2BQ16661 112 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 LRRC37A5PQ49AS3 106 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 C2orf83Q53S99 150 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 IL34Q6ZMJ4 242 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 DTD1Q8TEA8 209 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 C20orf24Q9BUV8 137 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 ZNF436Q9C0F3 470 aaPredicted RBP7.91□□□□□ -1.14
PTPRN-218ENST00000497977 MED28Q9H204 178 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 TMEM231Q9H6L2 316 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 LSM5Q9Y4Y9 91 aaKnown RBP7.91□□□□□ -1.14
PTPRN-218ENST00000497977 DMRT1Q9Y5R6 373 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 S4R3C0 116 aa7.91□□□□□ -1.14
PTPRN-218ENST00000497977 TGP01266 2768 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 IGHV3-21A0A0B4J1V1 117 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 A8MZ25 164 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 K7EIM0 57 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 IFNA4P05014 189 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 CTSGP08311 255 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 NKX2-1P43699 371 aaPredicted RBP7.9□□□□□ -1.14
PTPRN-218ENST00000497977 EIF2B2P49770 351 aaKnown RBP7.9□□□□□ -1.14
PTPRN-218ENST00000497977 FCN2Q15485 313 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 SLC24A4Q8NFF2 622 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 OR4X1Q8NH49 305 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 Q8WTZ3 238 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 HSPB7Q9UBY9 170 aa7.9□□□□□ -1.14
PTPRN-218ENST00000497977 RCL1Q9Y2P8 373 aaKnown RBP7.9□□□□□ -1.14
PTPRN-218ENST00000497977 CLN5O75503 358 aa7.89□□□□□ -1.15
PTPRN-218ENST00000497977 TMEM50AO95807 157 aa7.89□□□□□ -1.15
PTPRN-218ENST00000497977 C8orf88P0DMB2 117 aa7.89□□□□□ -1.15
PTPRN-218ENST00000497977 NPPCP23582 126 aa7.89□□□□□ -1.15
PTPRN-218ENST00000497977 GPX4P36969 197 aaPredicted RBP7.89□□□□□ -1.15
PTPRN-218ENST00000497977 POLR2GP62487 172 aaKnown RBP eCLIP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms