RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, human

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELL3-208	ENST00000497700	SPINK9	Q5DT21	86 aa		13.81	□□□□□ -0.2
ELL3-208	ENST00000497700	PPP1R27	Q86WC6	154 aa		13.81	□□□□□ -0.2
ELL3-208	ENST00000497700	TMEM252	Q8N6L7	170 aa		13.81	□□□□□ -0.2
ELL3-208	ENST00000497700	ZNF680	Q8NEM1	530 aa		13.81	□□□□□ -0.2
ELL3-208	ENST00000497700	COMMD5	Q9GZQ3	224 aa		13.81	□□□□□ -0.2
ELL3-208	ENST00000497700	SLC25A31	Q9H0C2	315 aa		13.81	□□□□□ -0.2
ELL3-208	ENST00000497700	ARL6	Q9H0F7	186 aa		13.81	□□□□□ -0.2
ELL3-208	ENST00000497700	KIAA1456	Q9P272	454 aa		13.81	□□□□□ -0.2
ELL3-208	ENST00000497700	EPPK1	P58107	5090 aa	Known RBP	13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	IGSF23	A1L1A6	192 aa		13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	HLA-DRB1	P01911	266 aa		13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	RAB9A	P51151	201 aa		13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	INSL3	P51460	131 aa		13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	CAV2	P51636	162 aa		13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	RUNX1	Q01196	453 aa		13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	HAPLN4	Q86UW8	402 aa		13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	SLC7A5P1	Q8MH63	180 aa		13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	CLCC1	Q96S66	551 aa		13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	ZC4H2	Q9NQZ6	224 aa		13.8	□□□□□ -0.2
ELL3-208	ENST00000497700	IGHV4OR15-8	A0A075B7B6	117 aa		13.79	□□□□□ -0.2
ELL3-208	ENST00000497700		A0A087WW49	117 aa		13.79	□□□□□ -0.2
ELL3-208	ENST00000497700	BCL2L11	O43521	198 aa		13.79	□□□□□ -0.2
ELL3-208	ENST00000497700	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
ELL3-208	ENST00000497700	C5orf64	Q2M2E5	130 aa		13.79	□□□□□ -0.2
ELL3-208	ENST00000497700	SPANXN5	Q5MJ07	72 aa		13.79	□□□□□ -0.2
ELL3-208	ENST00000497700	ZFAND6	Q6FIF0	208 aa		13.79	□□□□□ -0.2
ELL3-208	ENST00000497700	ARPC1A	Q92747	370 aa		13.79	□□□□□ -0.2
ELL3-208	ENST00000497700	HIPK2	Q9H2X6	1198 aa		13.79	□□□□□ -0.2
ELL3-208	ENST00000497700	HEYL	Q9NQ87	328 aa	Predicted RBP	13.79	□□□□□ -0.2
ELL3-208	ENST00000497700	NDUFA4L2	Q9NRX3	87 aa		13.79	□□□□□ -0.2
ELL3-208	ENST00000497700		A0A1W2PN81	502 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	KANTR	A0A1W2PQU2	76 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	CGB1	A6NKQ9	187 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700		H3BP45	60 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	FCN1	O00602	326 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	ACTL6B	O94805	426 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	GP9	P14770	177 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	CHRNA7	P36544	502 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	HTR2B	P41595	481 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	HOXA1	P49639	335 aa	Predicted RBP	13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	NHLH2	Q02577	135 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	BAX	Q07812	192 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	PLGLA	Q15195	96 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	ARPC5L	Q9BPX5	153 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	HINT2	Q9BX68	163 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	PLEKHA3	Q9HB20	300 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	ENY2	Q9NPA8	101 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	UBQLN2	Q9UHD9	624 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700	STARD9	Q9P2P6	4700 aa		13.78	□□□□□ -0.2
ELL3-208	ENST00000497700		E7EUB6	86 aa		13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	INS-IGF2	F8WCM5	200 aa		13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	TAAR5	O14804	337 aa		13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	IGHV3-11	P01762	117 aa		13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	RPL27A	P46776	148 aa	Known RBP	13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	RAB14	P61106	215 aa		13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	TNXA	Q16473	311 aa		13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	C19orf54	Q5BKX5	351 aa		13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	C10orf55	Q5SWW7	151 aa		13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	TMEM14EP	Q6UXP3	125 aa		13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	BSCL2	Q96G97	398 aa	Predicted RBP	13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	OR4C12	Q96R67	309 aa		13.77	□□□□□ -0.21
ELL3-208	ENST00000497700	STRAP	Q9Y3F4	350 aa	Known RBP	13.77	□□□□□ -0.21
ELL3-208	ENST00000497700		A0A1B0GW64	132 aa		13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	LINC01619	G3V211	115 aa		13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	CST7	O76096	145 aa		13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	CA2	P00918	260 aa		13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	SULT1A1	P50225	295 aa		13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	RPP30	P78346	268 aa	Known RBP	13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	SSBP2	P81877	361 aa	Predicted RBP	13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	SLC51B	Q86UW2	128 aa		13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	STX12	Q86Y82	276 aa		13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	CYTL1	Q9NRR1	136 aa		13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	FBXL17	Q9UF56	701 aa		13.76	□□□□□ -0.21
ELL3-208	ENST00000497700	C15orf62	A8K5M9	175 aa		13.75	□□□□□ -0.21
ELL3-208	ENST00000497700	METTL15P1	P0C7V9	234 aa		13.75	□□□□□ -0.21
ELL3-208	ENST00000497700	CLLU1	Q5K131	121 aa		13.75	□□□□□ -0.21
ELL3-208	ENST00000497700	OR10W1	Q8NGF6	305 aa		13.75	□□□□□ -0.21
ELL3-208	ENST00000497700	ABHD5	Q8WTS1	349 aa		13.75	□□□□□ -0.21
ELL3-208	ENST00000497700	FAM103A1	Q9BTL3	118 aa	Known RBP	13.75	□□□□□ -0.21
ELL3-208	ENST00000497700	LINC00862	A6NCI5	91 aa		13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	PMS2P5	A8MQ11	134 aa		13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	IFNA10	P01566	189 aa		13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	LGALS1	P09382	135 aa	Known RBP	13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	EGR2	P11161	476 aa	Predicted RBP	13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	ATP5I	P56385	69 aa	Predicted RBP	13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	CX3CL1	P78423	397 aa		13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	ERH	P84090	104 aa	Known RBP	13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	EXOSC2	Q13868	293 aa	Known RBP	13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	ACSM6	Q6P461	480 aa		13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	SRSF12	Q8WXF0	261 aa	Known RBP	13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	MS4A10	Q96PG2	267 aa		13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	SMIM3	Q9BZL3	60 aa		13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	WFDC1	Q9HC57	220 aa		13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	BIRC6	Q9NR09	4857 aa		13.74	□□□□□ -0.21
ELL3-208	ENST00000497700	LCE6A	A0A183	80 aa		13.73	□□□□□ -0.21
ELL3-208	ENST00000497700	SCAF4	O95104	1147 aa	Known RBP	13.73	□□□□□ -0.21
ELL3-208	ENST00000497700	CNIH1	O95406	144 aa		13.73	□□□□□ -0.21
ELL3-208	ENST00000497700	ARL16	Q0P5N6	197 aa		13.73	□□□□□ -0.21
ELL3-208	ENST00000497700	FXYD3	Q14802	87 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms