RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 ZNF701M0R085 212 aaPredicted RBP12.63□□□□□ -0.39
SMC4-226ENST00000497311 TNFSF8P32971 234 aa12.63□□□□□ -0.39
SMC4-226ENST00000497311 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMC4-226ENST00000497311 COPZ2Q9P299 210 aa12.63□□□□□ -0.39
SMC4-226ENST00000497311 ST8SIA3O43173 380 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 P0C879 139 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 TRIM16LQ309B1 348 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 STEAP1BQ6NZ63 245 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 ZNF600Q6ZNG1 722 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 OR4D10Q8NGI6 311 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 ZFAND1Q8TCF1 268 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 GATAD1Q8WUU5 269 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 ST8SIA2Q92186 375 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 RARRES2Q99969 163 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 SOSTQ9BQB4 213 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
SMC4-226ENST00000497311 PUS1Q9Y606 427 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMC4-226ENST00000497311 FABP12A6NFH5 140 aa12.61□□□□□ -0.39
SMC4-226ENST00000497311 DNASE2O00115 360 aaPredicted RBP12.61□□□□□ -0.39
SMC4-226ENST00000497311 CORTO00230 105 aa12.61□□□□□ -0.39
SMC4-226ENST00000497311 GSTZ1O43708 216 aaPredicted RBP12.61□□□□□ -0.39
SMC4-226ENST00000497311 RAB3DO95716 219 aa12.61□□□□□ -0.39
SMC4-226ENST00000497311 TMEM50AO95807 157 aa12.61□□□□□ -0.39
SMC4-226ENST00000497311 ETV6P41212 452 aa12.61□□□□□ -0.39
SMC4-226ENST00000497311 HOXA1P49639 335 aaPredicted RBP12.61□□□□□ -0.39
SMC4-226ENST00000497311 PPP5CP53041 499 aa12.61□□□□□ -0.39
SMC4-226ENST00000497311 CCDC71LQ8N9Z2 235 aa12.61□□□□□ -0.39
SMC4-226ENST00000497311 TERB2Q8NHR7 220 aa12.61□□□□□ -0.39
SMC4-226ENST00000497311 RRNAD1Q96FB5 475 aaKnown RBP12.61□□□□□ -0.39
SMC4-226ENST00000497311 ENY2Q9NPA8 101 aa12.61□□□□□ -0.39
SMC4-226ENST00000497311 IGHV3-66A0A0C4DH42 116 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 DFFBO76075 338 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 APOHP02749 345 aaPredicted RBP12.6□□□□□ -0.39
SMC4-226ENST00000497311 RNASE2P10153 161 aaKnown RBP12.6□□□□□ -0.39
SMC4-226ENST00000497311 RPL11P62913 178 aaKnown RBP12.6□□□□□ -0.39
SMC4-226ENST00000497311 MEF2DQ14814 521 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 SP6Q3SY56 376 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 SCGB2B2Q4G0G5 96 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 PVRIGQ6DKI7 326 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 LILRB2Q8N423 598 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 MS4A6AQ9H2W1 248 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 TMEM231Q9H6L2 316 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 ZFAND3Q9H8U3 227 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 KMT2AQ03164 3969 aa12.6□□□□□ -0.39
SMC4-226ENST00000497311 B3GALNT1O75752 331 aa12.59□□□□□ -0.39
SMC4-226ENST00000497311 UCP1P25874 307 aa12.59□□□□□ -0.39
SMC4-226ENST00000497311 OR13C8Q8NGS7 320 aa12.59□□□□□ -0.39
SMC4-226ENST00000497311 RNASE11Q8TAA1 199 aaKnown RBP12.59□□□□□ -0.39
SMC4-226ENST00000497311 PHLDA1Q8WV24 401 aaPredicted RBP12.59□□□□□ -0.39
SMC4-226ENST00000497311 TRAV2A0A0B4J234 112 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 A0A1B0GU03 582 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 A0A1W2PS18 150 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 CLN5O75503 358 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 SCGB2A1O75556 95 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 AKAIN1P0CW23 69 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 NPPCP23582 126 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 OPRK1P41145 380 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 DEFB131AP59861 70 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 OR11H2Q8NH07 326 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 MARCH1Q8TCQ1 289 aa12.58□□□□□ -0.4
SMC4-226ENST00000497311 A0A0G2JRQ6 117 aa12.57□□□□□ -0.4
SMC4-226ENST00000497311 ANKRD20A5PA0PJZ0 165 aa12.57□□□□□ -0.4
SMC4-226ENST00000497311 CA1P00915 261 aaPredicted RBP12.57□□□□□ -0.4
SMC4-226ENST00000497311 S100A5P33763 92 aa12.57□□□□□ -0.4
SMC4-226ENST00000497311 LEMD1Q68G75 181 aa12.57□□□□□ -0.4
SMC4-226ENST00000497311 FAAP20Q6NZ36 180 aa12.57□□□□□ -0.4
SMC4-226ENST00000497311 OR4C16Q8NGL9 310 aa12.57□□□□□ -0.4
SMC4-226ENST00000497311 OR4X1Q8NH49 305 aa12.57□□□□□ -0.4
SMC4-226ENST00000497311 METTL26Q96S19 204 aa12.57□□□□□ -0.4
SMC4-226ENST00000497311 FNDC4Q9H6D8 234 aaPredicted RBP12.57□□□□□ -0.4
SMC4-226ENST00000497311 RABAC1Q9UI14 185 aa12.57□□□□□ -0.4
SMC4-226ENST00000497311 DISC1C4P0D8 188 aa12.56□□□□□ -0.4
SMC4-226ENST00000497311 MLANAQ16655 118 aa12.56□□□□□ -0.4
SMC4-226ENST00000497311 Q6ZRM9 215 aa12.56□□□□□ -0.4
SMC4-226ENST00000497311 FAM219AQ8IW50 185 aa12.56□□□□□ -0.4
SMC4-226ENST00000497311 C11orf45Q8TAV5 145 aa12.56□□□□□ -0.4
SMC4-226ENST00000497311 TMEM230Q96A57 120 aa12.56□□□□□ -0.4
SMC4-226ENST00000497311 MFFQ9GZY8 342 aa12.56□□□□□ -0.4
SMC4-226ENST00000497311 TMEM222Q9H0R3 208 aa12.56□□□□□ -0.4
SMC4-226ENST00000497311 C11orf68Q9H3H3 251 aaKnown RBP12.56□□□□□ -0.4
SMC4-226ENST00000497311 MRPL36Q9P0J6 103 aaKnown RBP12.56□□□□□ -0.4
SMC4-226ENST00000497311 C14orf166Q9Y224 244 aaKnown RBP12.56□□□□□ -0.4
SMC4-226ENST00000497311 CDS2O95674 445 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 OR5AC1P0C628 307 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 SPCS3P61009 180 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 TMEM187Q14656 261 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 BSXQ3C1V8 233 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 CCDC190Q86UF4 302 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 STHQ8IWL8 128 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 FAM24BQ8N5W8 94 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 OR52E5Q8NH55 327 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 NARS2Q96I59 477 aaKnown RBP12.55□□□□□ -0.4
SMC4-226ENST00000497311 PRRT1Q99946 306 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.55□□□□□ -0.4
SMC4-226ENST00000497311 NDUFA13Q9P0J0 144 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 V9GYH0 126 aa12.55□□□□□ -0.4
SMC4-226ENST00000497311 TRAV30A0A087WSZ9 112 aa12.54□□□□□ -0.4
SMC4-226ENST00000497311 TEX13DA0A0J9YY54 714 aaPredicted RBP12.54□□□□□ -0.4
SMC4-226ENST00000497311 RPS10-NUDT3A0A1W2PQS6 291 aa12.54□□□□□ -0.4
SMC4-226ENST00000497311 IFNA4P05014 189 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms