RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 FAM27D1Q5T7N8 215 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 LYRM7Q5U5X0 104 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TMEM42Q69YG0 159 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 FOXI2Q6ZQN5 318 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TRAPPC6BQ86SZ2 158 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 BOD1L2Q8IYS8 172 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TMEM251Q8N6I4 163 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TMEM252Q8N6L7 170 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 NPWQ8N729 165 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ZNF676Q8N7Q3 588 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 SGMS2Q8NHU3 365 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 VSTM2AQ8TAG5 236 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 OR51E1Q8TCB6 317 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 MRPL30Q8TCC3 161 aaKnown RBP2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 MBD3L1Q8WWY6 194 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 FAM131CQ96AQ9 280 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 WDR34Q96EX3 536 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 PELI1Q96FA3 418 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ADTRPQ96IZ2 230 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 KCNS1Q96KK3 526 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TBX5Q99593 518 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 RSPO3Q9BXY4 272 aaPredicted RBP2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 EBPLQ9BY08 206 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 COA1Q9GZY4 146 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 GTSF1LQ9H1H1 148 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 UBE2ZQ9H832 354 aaPredicted RBP2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 PLEKHF2Q9H8W4 249 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 SIGLEC8Q9NYZ4 499 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 IL36GQ9NZH8 169 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 MTCH1Q9NZJ7 389 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 GNG13Q9P2W3 67 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 MMP17Q9ULZ9 603 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 PSG8Q9UQ74 426 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 HS3ST2Q9Y278 367 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ZNF257Q9Y2Q1 563 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 POLR1DQ9Y2S0 133 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 UFC1Q9Y3C8 167 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 LSM5Q9Y4Y9 91 aaKnown RBP2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ZNF780BQ9Y6R6 833 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ROBO1Q9Y6N7 1651 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ITGB4P16144 1822 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 GLI3P10071 1580 aa2.4□□□□□ -2.03
RAB3GAP1-206ENST00000497080 PDCD11Q14690 1871 aaKnown RBP2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 STRCQ7RTU9 1775 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ANKRD36A6QL64 1941 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 A0A0U1RRA0 63 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 CEBPZOSA8MTT3 80 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 F8WDY8 70 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 CDC42EP2O14613 210 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 RAB29O14966 203 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 SLC25A14O95258 325 aaPredicted RBP2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TNFP01375 233 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 HLA-DQA1P01909 254 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 GYPAP02724 150 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TTRP02766 147 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ISG15P05161 165 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 GPX1P07203 203 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 OR5AL1P0C617 328 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 HIST1H1CP16403 213 aaKnown RBP2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 HIST1H1TP22492 207 aaPredicted RBP2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 CRYBB3P26998 211 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 HTR1DP28221 377 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 OPRM1P35372 400 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 CCR2P41597 374 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 CA7P43166 264 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 KIR2DS2P43631 304 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 DUSP3P51452 185 aaPredicted RBP2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 RPS11P62280 158 aaKnown RBP eCLIP2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 GNG3P63215 75 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 LAMTOR4Q0VGL1 99 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 KLRD1Q13241 179 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 EIF3IQ13347 325 aaKnown RBP2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 PMVKQ15126 192 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ABCA11PQ4W5N1 156 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TIMM23BQ5SRD1 257 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 GLYATL3Q5SZD4 288 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 BVES-AS1Q5T3Y7 98 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ZFAND6Q6FIF0 208 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ZNF880Q6PDB4 577 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 RASL11AQ6T310 242 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 Q6ZS92 163 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 RFLNAQ6ZTI6 216 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 H2BFWTQ7Z2G1 175 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 BPIFA4PQ86YQ2 179 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TMEM86AQ8N2M4 240 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 CLDN19Q8N6F1 224 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TEX29Q8N6K0 151 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ZIC4Q8N9L1 334 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 LRRC75AQ8NAA5 344 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 OR4X2Q8NGF9 303 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 OR9G4Q8NGQ1 327 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 OR6N2Q8NGY6 317 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 OR10AG1Q8NH19 301 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ATP6V0E2Q8NHE4 81 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 MCHR1Q99705 422 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 GPA33Q99795 319 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 RARRES2Q99969 163 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 GGTLC1Q9BX51 225 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 PECRQ9BY49 303 aa2.39□□□□□ -2.03
RAB3GAP1-206ENST00000497080 SMIM3Q9BZL3 60 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms