RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ADARB2-AS1A8MUL3 147 aa16.84■□□□□ 0.29
C9orf3-222ENST00000496567 I3L521 148 aa16.84■□□□□ 0.29
C9orf3-222ENST00000496567 METTL15P1P0C7V9 234 aa16.84■□□□□ 0.29
C9orf3-222ENST00000496567 SLC25A4P12235 298 aa16.84■□□□□ 0.29
C9orf3-222ENST00000496567 GPX4P36969 197 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-222ENST00000496567 MFAP4P55083 255 aa16.84■□□□□ 0.29
C9orf3-222ENST00000496567 CD69Q07108 199 aa16.84■□□□□ 0.29
C9orf3-222ENST00000496567 ZNF502Q8TBZ5 544 aa16.84■□□□□ 0.29
C9orf3-222ENST00000496567 CACNG8Q8WXS5 425 aa16.84■□□□□ 0.29
C9orf3-222ENST00000496567 SLC25A31Q9H0C2 315 aa16.84■□□□□ 0.29
C9orf3-222ENST00000496567 FNDC4Q9H6D8 234 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-222ENST00000496567 S4R3C0 116 aa16.84■□□□□ 0.29
C9orf3-222ENST00000496567 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.83■□□□□ 0.28
C9orf3-222ENST00000496567 TRAV14DV4A0A0A6YYC5 116 aa16.83■□□□□ 0.28
C9orf3-222ENST00000496567 LYL1P12980 280 aa16.83■□□□□ 0.28
C9orf3-222ENST00000496567 C18orf65Q6ZTR6 163 aa16.83■□□□□ 0.28
C9orf3-222ENST00000496567 STX12Q86Y82 276 aa16.83■□□□□ 0.28
C9orf3-222ENST00000496567 OR10P1Q8NGE3 313 aa16.83■□□□□ 0.28
C9orf3-222ENST00000496567 TXN2Q99757 166 aa16.83■□□□□ 0.28
C9orf3-222ENST00000496567 GAR1Q9NY12 217 aaKnown RBP16.83■□□□□ 0.28
C9orf3-222ENST00000496567 IGHV3-23P01764 117 aa16.82■□□□□ 0.28
C9orf3-222ENST00000496567 FCGR2BP31994 310 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-222ENST00000496567 NPBWR1P48145 328 aa16.82■□□□□ 0.28
C9orf3-222ENST00000496567 EIF2B2P49770 351 aaKnown RBP16.82■□□□□ 0.28
C9orf3-222ENST00000496567 OR8G2PQ6IF36 304 aa16.82■□□□□ 0.28
C9orf3-222ENST00000496567 ACSM6Q6P461 480 aa16.82■□□□□ 0.28
C9orf3-222ENST00000496567 C8orf86Q6ZUL3 223 aa16.82■□□□□ 0.28
C9orf3-222ENST00000496567 TMEM252Q8N6L7 170 aa16.82■□□□□ 0.28
C9orf3-222ENST00000496567 DCUN1D4Q92564 292 aa16.82■□□□□ 0.28
C9orf3-222ENST00000496567 CCDC140Q96MF4 163 aa16.82■□□□□ 0.28
C9orf3-222ENST00000496567 PEF1Q9UBV8 284 aaKnown RBP16.82■□□□□ 0.28
C9orf3-222ENST00000496567 PMS2P5A8MQ11 134 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 PRSS46E5RG02 174 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 IGHV3-48P01763 117 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 SULT1A1P50225 295 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 NKX2-5P52952 324 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-222ENST00000496567 MLANAQ16655 118 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 Q56UQ5 140 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 SLC16A13Q7RTY0 426 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 OR11H4Q8NGC9 324 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 STAB1Q9NY15 2570 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 ANKRD34BA5PLL1 514 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 HSPB1P04792 205 aaKnown RBP16.81■□□□□ 0.28
C9orf3-222ENST00000496567 CLEC3BP05452 202 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 CLEC19AQ6UXS0 136 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 UBAC2Q8NBM4 344 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 SLC35E1Q96K37 410 aa16.81■□□□□ 0.28
C9orf3-222ENST00000496567 IGSF23A1L1A6 192 aa16.8■□□□□ 0.28
C9orf3-222ENST00000496567 CST7O76096 145 aa16.8■□□□□ 0.28
C9orf3-222ENST00000496567 TMEM116Q8NCL8 245 aa16.8■□□□□ 0.28
C9orf3-222ENST00000496567 OR4F17Q8NGA8 305 aa16.8■□□□□ 0.28
C9orf3-222ENST00000496567 OR4X1Q8NH49 305 aa16.8■□□□□ 0.28
C9orf3-222ENST00000496567 SPATA3Q8NHX4 192 aa16.8■□□□□ 0.28
C9orf3-222ENST00000496567 BSCL2Q96G97 398 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-222ENST00000496567 OR4F4Q96R69 305 aa16.8■□□□□ 0.28
C9orf3-222ENST00000496567 GNG7O60262 68 aa16.79■□□□□ 0.28
C9orf3-222ENST00000496567 GPR183P32249 361 aa16.79■□□□□ 0.28
C9orf3-222ENST00000496567 HBG1P69891 147 aa16.79■□□□□ 0.28
C9orf3-222ENST00000496567 HBG2P69892 147 aa16.79■□□□□ 0.28
C9orf3-222ENST00000496567 BAXQ07812 192 aa16.79■□□□□ 0.28
C9orf3-222ENST00000496567 OR11H1Q8NG94 326 aa16.79■□□□□ 0.28
C9orf3-222ENST00000496567 DPF1Q92782 380 aa16.79■□□□□ 0.28
C9orf3-222ENST00000496567 GGACTQ9BVM4 153 aa16.79■□□□□ 0.28
C9orf3-222ENST00000496567 OR2T8A6NH00 312 aa16.78■□□□□ 0.28
C9orf3-222ENST00000496567 SCGB2A1O75556 95 aa16.78■□□□□ 0.28
C9orf3-222ENST00000496567 RPL12P30050 165 aaKnown RBP16.78■□□□□ 0.28
C9orf3-222ENST00000496567 S100A11P31949 105 aa16.78■□□□□ 0.28
C9orf3-222ENST00000496567 ARL3P36405 182 aa16.78■□□□□ 0.28
C9orf3-222ENST00000496567 NUP62P37198 522 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-222ENST00000496567 DLK1P80370 383 aa16.78■□□□□ 0.28
C9orf3-222ENST00000496567 EWSR1Q01844 656 aaKnown RBP eCLIP16.78■□□□□ 0.28
C9orf3-222ENST00000496567 ZNF616Q08AN1 781 aa16.78■□□□□ 0.28
C9orf3-222ENST00000496567 DEFB136Q30KP8 78 aa16.78■□□□□ 0.28
C9orf3-222ENST00000496567 SPSB3Q6PJ21 355 aa16.78■□□□□ 0.28
C9orf3-222ENST00000496567 OR1N2Q8NGR9 330 aa16.78■□□□□ 0.28
C9orf3-222ENST00000496567 F8W735 103 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-222ENST00000496567 LINC01619G3V211 115 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 M0QZ24 198 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 CCL24O00175 119 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 CLN5O75503 358 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 RND2P52198 227 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 SLC38A11Q08AI6 406 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 GAMTQ14353 236 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 ACOT7LQ6ZUV0 252 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 HAPLN4Q86UW8 402 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 TMEM217Q8N7C4 229 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 ACY3Q96HD9 319 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 RAX2Q96IS3 184 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 HYLS1Q96M11 299 aa16.77■□□□□ 0.28
C9orf3-222ENST00000496567 IGHV4OR15-8A0A075B7B6 117 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 TRAV30A0A087WSZ9 112 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 A0A087WW49 117 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 FXYD6-FXYD2A0A087WZ82 144 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 FNDC10F2Z333 226 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 TGOLN2O43493 480 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 TRBV12-3P01733 135 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 MYCNOSP40205 109 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 ARL16Q0P5N6 197 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 ZNF546Q86UE3 836 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 NPIPB3Q92617 1050 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms