RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SRRM4A7MD48 611 aaKnown RBP6.81□□□□□ -1.32
U2AF1-212ENST00000496462 METTL15P1P0C7V9 234 aa6.81□□□□□ -1.32
U2AF1-212ENST00000496462 ZNF471Q9BX82 626 aaPredicted RBP6.81□□□□□ -1.32
U2AF1-212ENST00000496462 FBXL17Q9UF56 701 aa6.81□□□□□ -1.32
U2AF1-212ENST00000496462 MXRA5Q9NR99 2828 aa6.81□□□□□ -1.32
U2AF1-212ENST00000496462 ID1P41134 155 aa6.81□□□□□ -1.32
U2AF1-212ENST00000496462 NMSQ5H8A3 153 aa6.81□□□□□ -1.32
U2AF1-212ENST00000496462 IGLV2-23P01705 113 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 OR10J1P30954 320 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 CAMLGP49069 296 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 OR2F1Q13607 317 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 ACOT6Q3I5F7 207 aaPredicted RBP6.8□□□□□ -1.32
U2AF1-212ENST00000496462 PXDC1Q5TGL8 231 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 Q6ZPA2 131 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 ZNF747Q9BV97 191 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 MBD2Q9UBB5 411 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 MPC2O95563 127 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 ATF4P18848 351 aaPredicted RBP6.8□□□□□ -1.32
U2AF1-212ENST00000496462 FGF7P21781 194 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 GALR1P47211 349 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 LYZP61626 148 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 CLINT1Q14677 625 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 FAM74A1Q5RGS3 127 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 PVRIGQ6DKI7 326 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 RABAC1Q9UI14 185 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 ZNF785A8K8V0 405 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 CCL24O00175 119 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 OVOL1O14753 267 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 JTBO76095 146 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 IL6RP08887 468 aaPredicted RBP6.8□□□□□ -1.32
U2AF1-212ENST00000496462 IZUMO4Q1ZYL8 232 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 TUSC1Q2TAM9 212 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 ACOT7LQ6ZUV0 252 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 C4orf3Q8WVX3 66 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 HSPB9Q9BQS6 159 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 ARL6Q9H0F7 186 aa6.8□□□□□ -1.32
U2AF1-212ENST00000496462 TRAV3A0A0B4J244 114 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 A0A0B4J293 547 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 ARPC5O15511 151 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 CTRB1P17538 263 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 SUPT4H1P63272 117 aaKnown RBP6.79□□□□□ -1.32
U2AF1-212ENST00000496462 ID3Q02535 119 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 GUCA2BQ16661 112 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 C9orf66Q5T8R8 295 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 CTRB2Q6GPI1 263 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 C11orf87Q6NUJ2 197 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 IGHV3-21A0A0B4J1V1 117 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 FAM24AA6NFZ4 105 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 CST7O76096 145 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 TSPAN15O95858 294 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 CLEC3BP05452 202 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 CD69Q07108 199 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 TMEM95Q3KNT9 176 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 OR11H1Q8NG94 326 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 TPSG1Q9NRR2 321 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 PLSCR3Q9NRY6 295 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 PROP1O75360 226 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 HYPMO75409 117 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 SAP30O75446 220 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 DEDDO75618 318 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 MBPP02686 304 aaPredicted RBP6.79□□□□□ -1.32
U2AF1-212ENST00000496462 TPT1P13693 172 aaKnown RBP6.79□□□□□ -1.32
U2AF1-212ENST00000496462 AREGP15514 252 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 BTCP35070 178 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 INSL3P51460 131 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 C1QL4Q86Z23 238 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 Q8N2B8 174 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 STXBP6Q8NFX7 210 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 OR10W1Q8NGF6 305 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 SMIM3Q9BZL3 60 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 SVEP1Q4LDE5 3571 aa6.79□□□□□ -1.32
U2AF1-212ENST00000496462 INS-IGF2F8WCM5 200 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 TGOLN2O43493 480 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 CLN5O75503 358 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 IFNA1P01562 189 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 RPLP1P05386 114 aaKnown RBP6.78□□□□□ -1.32
U2AF1-212ENST00000496462 CRYGCP07315 174 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 OR8I2Q8N0Y5 310 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 OR51G1Q8NGK1 321 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 PIFOQ8TCI5 191 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 NPIPB3Q92617 1050 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 ESM1Q9NQ30 184 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 LYRM2Q9NU23 88 aaPredicted RBP6.78□□□□□ -1.32
U2AF1-212ENST00000496462 CITED2Q99967 270 aaPredicted RBP6.78□□□□□ -1.32
U2AF1-212ENST00000496462 HIGD1AQ9Y241 93 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 UBE2L5PA0A1B0GUS4 154 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 CRYGBP07316 175 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 CSN1S1P47710 185 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 MEOX2P50222 304 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 UTF1Q5T230 341 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 ZNF114Q8NC26 417 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 OR5C1Q8NGR4 320 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 LHFPL5Q8TAF8 219 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 OR10C1Q96KK4 312 aa6.78□□□□□ -1.32
U2AF1-212ENST00000496462 OR4C46A6NHA9 309 aa6.77□□□□□ -1.32
U2AF1-212ENST00000496462 FNDC10F2Z333 226 aa6.77□□□□□ -1.32
U2AF1-212ENST00000496462 CRIP2P52943 208 aaPredicted RBP6.77□□□□□ -1.32
U2AF1-212ENST00000496462 IFITM3Q01628 133 aa6.77□□□□□ -1.32
U2AF1-212ENST00000496462 BTNL8Q6UX41 500 aa6.77□□□□□ -1.32
U2AF1-212ENST00000496462 TMEM252Q8N6L7 170 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms