RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 CXCL16Q9H2A7 254 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 CST9LQ9H4G1 147 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 LYRM2Q9NU23 88 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-212ENST00000496458 BTRCQ9Y297 605 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 ATG2AQ2TAZ0 1938 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 SPTBN2O15020 2390 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 PDCD11Q14690 1871 aaKnown RBP3.07□□□□□ -1.92
SF3B1-212ENST00000496458 ATG2BQ96BY7 2078 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 IGKV1-27A0A075B6S5 117 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 IGHV6-1A0A0B4J1U7 121 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 LOC285095A0A1B0GVY8 99 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 OR6C6A6NF89 314 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 NAP1L6A6NFF2 107 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 CORTO00230 105 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 MANBAO00462 879 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 FFAR1O14842 300 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 GCM2O75603 506 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-212ENST00000496458 PROSCO94903 275 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 FABP3P05413 133 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 ADRA2AP08913 450 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 OR5G3P0C626 314 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 ZNF708P17019 499 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 NFYBP25208 207 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 REG1BP48304 166 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 PRDX4Q13162 271 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 PAFAH1B3Q15102 231 aaKnown RBP3.07□□□□□ -1.92
SF3B1-212ENST00000496458 PMVKQ15126 192 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 ATP6AP1LQ52LC2 224 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 TCEAL5Q5H9L2 206 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 ZNF684Q5T5D7 378 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 HENMT1Q5T8I9 393 aaKnown RBP3.07□□□□□ -1.92
SF3B1-212ENST00000496458 SMARCD3Q6STE5 483 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 SCGB1D4Q6XE38 83 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 SLC35E3Q7Z769 313 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 KCNRGQ8N5I3 272 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 LINC00337Q8N6G1 96 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 MFSD8Q8NHS3 518 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 REEP6Q96HR9 211 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 SIGMAR1Q99720 223 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 HIST1H2BLQ99880 126 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 TMEM243Q9BU79 118 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 EBPLQ9BY08 206 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 MS4A8Q9BY19 250 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 SLC25A31Q9H0C2 315 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 TXNIPQ9H3M7 391 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 SPANXA1Q9NS26 97 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 MRPL27Q9P0M9 148 aaKnown RBP3.07□□□□□ -1.92
SF3B1-212ENST00000496458 CACFD1Q9UGQ2 172 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 HEBP2Q9Y5Z4 205 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 COL4A6Q14031 1691 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 DOCK8Q8NF50 2099 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 MYO18AQ92614 2054 aaKnown RBP3.07□□□□□ -1.92
SF3B1-212ENST00000496458 CNOT1A5YKK6 2376 aaKnown RBP3.07□□□□□ -1.92
SF3B1-212ENST00000496458 FAM186AA6NE01 2351 aa3.07□□□□□ -1.92
SF3B1-212ENST00000496458 FRYLO94915 3013 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 WDFY4Q6ZS81 3184 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 A0A087WWC5 75 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 KANTRA0A1W2PQU2 76 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 MYBPHLA2RUH7 354 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 C7orf77A4D0Y5 90 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 C5orf67F2Z3F1 127 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 APOC4-APOC2K7ER74 178 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 FXYD1O00168 92 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 GSTZ1O43708 216 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-212ENST00000496458 MFSD11O43934 449 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 DHRS3O75911 302 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 MT-CO2P00403 227 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 SOD3P08294 240 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 CD14P08571 375 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 OR13C7P0DN81 318 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 CXCL8P10145 99 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 SLC25A4P12235 298 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 FABP4P15090 132 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 GPX2P18283 190 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 OR10J1P30954 320 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 OR1E2P47887 323 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 GZMMP51124 257 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 AKR1C2P52895 323 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 TAS2R41P59536 307 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 BTN3A2P78410 334 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 CDK5Q00535 292 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 PSG4Q00888 419 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 C1DQ13901 141 aaKnown RBP3.06□□□□□ -1.92
SF3B1-212ENST00000496458 EBPQ15125 230 aaKnown RBP3.06□□□□□ -1.92
SF3B1-212ENST00000496458 SSX1Q16384 188 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 RSPO1Q2MKA7 263 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-212ENST00000496458 SPATA31B1PQ5VZV4 182 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 OPN5Q6U736 354 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 IGFL1Q6UW32 110 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 TMEM205Q6UW68 189 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 NEGR1Q7Z3B1 354 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 TMEM183AQ8IXX5 376 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 C20orf196Q8IYI0 205 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 SLC25A45Q8N413 288 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 RNF182Q8N6D2 247 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 OR4X1Q8NH49 305 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 C15orf40Q8WUR7 153 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 NEURL3Q96EH8 262 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 VPS13AQ96RL7 3174 aa3.06□□□□□ -1.92
SF3B1-212ENST00000496458 PRSS27Q9BQR3 290 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms