RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 IL18Q14116 193 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 ZNF600Q6ZNG1 722 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 Q6ZWC4 215 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 KIR2DL5AQ8N109 375 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 LILRB2Q8N423 598 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 DUSP18Q8NEJ0 188 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 KIR2DL5BQ8NHK3 375 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 RRNAD1Q96FB5 475 aaKnown RBP10.54□□□□□ -0.72
VTI1A-209ENST00000496445 DIRAS2Q96HU8 199 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 PDCD10Q9BUL8 212 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 VSIRQ9H7M9 311 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 PUS1Q9Y606 427 aaKnown RBP eCLIP10.54□□□□□ -0.72
VTI1A-209ENST00000496445 VPS13DQ5THJ4 4388 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 A0A0J9YWU9 116 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 TEX13DA0A0J9YY54 714 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-209ENST00000496445 CRYM-AS1A6NIL9 109 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 DISC1C4P0D8 188 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 SPRY2O43597 315 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 TMEM50AO95807 157 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 AKAIN1P0CW23 69 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 SURF2Q15527 256 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-209ENST00000496445 FAM219AQ8IW50 185 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 SELENOHQ8IZQ5 122 aaKnown RBP10.53□□□□□ -0.72
VTI1A-209ENST00000496445 RNASE11Q8TAA1 199 aaKnown RBP10.53□□□□□ -0.72
VTI1A-209ENST00000496445 RNF183Q96D59 192 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 GALNT14Q96FL9 552 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 BCL7BQ9BQE9 202 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 GINS3Q9BRX5 216 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 MAP6D1Q9H9H5 199 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 GPR132Q9UNW8 380 aa10.53□□□□□ -0.72
VTI1A-209ENST00000496445 C14orf166Q9Y224 244 aaKnown RBP10.53□□□□□ -0.72
VTI1A-209ENST00000496445 IGHV3-66A0A0C4DH42 116 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 CORTO00230 105 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 UBE2CO00762 179 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 CLN5O75503 358 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 JTBO76095 146 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 BMI1P35226 326 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 OPRK1P41145 380 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 SUB1P53999 127 aaKnown RBP eCLIP10.52□□□□□ -0.73
VTI1A-209ENST00000496445 TMBIM6P55061 237 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 SPCS3P61009 180 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 TNFRSF9Q07011 255 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 MLANAQ16655 118 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 TCF24Q7RTU0 167 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 LYG2Q86SG7 212 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 GBGT1Q8N5D6 347 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 STPG3Q8N7X2 389 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 OR51S1Q8NGJ8 323 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 OR52E5Q8NH55 327 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 RBPMSQ93062 196 aaKnown RBP10.52□□□□□ -0.73
VTI1A-209ENST00000496445 TMEM230Q96A57 120 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 GPR146Q96CH1 333 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 SLIRPQ9GZT3 109 aaKnown RBP10.52□□□□□ -0.73
VTI1A-209ENST00000496445 C6orf62Q9GZU0 229 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-209ENST00000496445 ENY2Q9NPA8 101 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 CACNG5Q9UF02 275 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 DNAH6Q9C0G6 4158 aa10.52□□□□□ -0.73
VTI1A-209ENST00000496445 ANKRD20A5PA0PJZ0 165 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 H3BMQ9 156 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 GSTZ1O43708 216 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-209ENST00000496445 DFFBO76075 338 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 RPL5P46777 297 aaKnown RBP10.51□□□□□ -0.73
VTI1A-209ENST00000496445 TMEM268Q5VZI3 342 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 OR4X1Q8NH49 305 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 PRRT1Q99946 306 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 MS4A6AQ9H2W1 248 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 PRR13Q9NZ81 148 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 RABL2AQ9UBK7 228 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-209ENST00000496445 RABL2BQ9UNT1 228 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 TMEM56-RWDD3S4R434 201 aa10.51□□□□□ -0.73
VTI1A-209ENST00000496445 IGKV1-17P01599 117 aa10.5□□□□□ -0.73
VTI1A-209ENST00000496445 DHODHQ02127 395 aa10.5□□□□□ -0.73
VTI1A-209ENST00000496445 PMS2P11Q13670 270 aa10.5□□□□□ -0.73
VTI1A-209ENST00000496445 TMEM170AQ8WVE7 144 aa10.5□□□□□ -0.73
VTI1A-209ENST00000496445 SOSTQ9BQB4 213 aa10.5□□□□□ -0.73
VTI1A-209ENST00000496445 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.5□□□□□ -0.73
VTI1A-209ENST00000496445 HTR2BP41595 481 aa10.49□□□□□ -0.73
VTI1A-209ENST00000496445 TMEM187Q14656 261 aa10.49□□□□□ -0.73
VTI1A-209ENST00000496445 TIGITQ495A1 244 aa10.49□□□□□ -0.73
VTI1A-209ENST00000496445 C2orf83Q53S99 150 aa10.49□□□□□ -0.73
VTI1A-209ENST00000496445 TRAV2A0A0B4J234 112 aa10.48□□□□□ -0.73
VTI1A-209ENST00000496445 NXPH3O95157 252 aa10.48□□□□□ -0.73
VTI1A-209ENST00000496445 CD5P06127 495 aa10.48□□□□□ -0.73
VTI1A-209ENST00000496445 CRYBB3P26998 211 aa10.48□□□□□ -0.73
VTI1A-209ENST00000496445 SUPT4H1P63272 117 aaKnown RBP10.48□□□□□ -0.73
VTI1A-209ENST00000496445 PAFAH1B2P68402 229 aa10.48□□□□□ -0.73
VTI1A-209ENST00000496445 PRSS54Q6PEW0 395 aa10.48□□□□□ -0.73
VTI1A-209ENST00000496445 SLC24A4Q8NFF2 622 aa10.48□□□□□ -0.73
VTI1A-209ENST00000496445 IL22RA2Q969J5 263 aa10.48□□□□□ -0.73
VTI1A-209ENST00000496445 CSTL1Q9H114 145 aa10.48□□□□□ -0.73
VTI1A-209ENST00000496445 HEYLQ9NQ87 328 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-209ENST00000496445 RSL24D1Q9UHA3 163 aaKnown RBP10.48□□□□□ -0.73
VTI1A-209ENST00000496445 AGRNO00468 2067 aa10.48□□□□□ -0.73
VTI1A-209ENST00000496445 CXorf65A6NEN9 183 aa10.47□□□□□ -0.73
VTI1A-209ENST00000496445 CEBPZOSA8MTT3 80 aa10.47□□□□□ -0.73
VTI1A-209ENST00000496445 IGLC1P0CG04 106 aa10.47□□□□□ -0.73
VTI1A-209ENST00000496445 ATF4P18848 351 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-209ENST00000496445 TNFSF8P32971 234 aa10.47□□□□□ -0.73
VTI1A-209ENST00000496445 CMC4P56277 68 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms