RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 RPL7P18124 248 aaKnown RBP7.59□□□□□ -1.2
GAPVD1-219ENST00000495955 GATA2P23769 480 aaPredicted RBP7.59□□□□□ -1.2
GAPVD1-219ENST00000495955 TAGLN2P37802 199 aaKnown RBP7.59□□□□□ -1.2
GAPVD1-219ENST00000495955 RAB9AP51151 201 aa7.59□□□□□ -1.2
GAPVD1-219ENST00000495955 SERF2P84101 59 aa7.59□□□□□ -1.2
GAPVD1-219ENST00000495955 LINC00305Q7Z4B0 112 aa7.59□□□□□ -1.2
GAPVD1-219ENST00000495955 ZNF429Q86V71 674 aa7.59□□□□□ -1.2
GAPVD1-219ENST00000495955 USMG5Q96IX5 58 aa7.59□□□□□ -1.2
GAPVD1-219ENST00000495955 CCDC168Q8NDH2 2452 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 HELTA6NFD8 242 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 H3BTX0 84 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 FSTL3O95633 263 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 CXCL2P19875 107 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 S100A4P26447 101 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 OR4D5Q8NGN0 318 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 F11RQ9Y624 299 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 SELENOKQ9Y6D0 94 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 ELOA3CA0A087WX78 387 aaPredicted RBP7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 CTXND1A0A1B0GTU2 59 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 AMY1AP04745 511 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 IL6RP08887 468 aaPredicted RBP7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 SNRPD3P62318 126 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 ID3Q02535 119 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 NMSQ5H8A3 153 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 OR4B1Q8NGF8 309 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 PRDM13Q9H4Q3 707 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 HIVEP2P31629 2446 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 A0A0G2JRQ6 117 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 FAM223BA6NKX1 122 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 CD69Q07108 199 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 FAM223AQ8IWN6 122 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 C9orf62Q8N4C0 152 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 SMIM7Q9BQ49 75 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 TRAV14DV4A0A0A6YYC5 116 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 PHYHIPLQ96FC7 376 aa7.58□□□□□ -1.2
GAPVD1-219ENST00000495955 A0A1W2PPI3 338 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 OR2C1O95371 312 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 ZNF600Q6ZNG1 722 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 KLHDC1Q8N7A1 406 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 OR10J6PQ8NGY7 276 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 AGMATQ9BSE5 352 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 NPCDR1Q9BY65 106 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 WDR61Q9GZS3 305 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 TRBV7-1A0A0A6YYK4 115 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 SEC11BP0C7V7 166 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 LY6G5BQ8NDX9 201 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 PRELID1Q9Y255 219 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 EIF3GO75821 320 aaKnown RBP eCLIP7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 TMEM95Q3KNT9 176 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 C2orf83Q53S99 150 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 LY6G6FQ5SQ64 297 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 ZNF439Q8NDP4 499 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 SHANK1Q9Y566 2161 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 ATP6V1G1O75348 118 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 HLA-DRB1P01911 266 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 S100A6P06703 90 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 PAX5Q02548 391 aa7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 FAM110DQ8TAY7 271 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-219ENST00000495955 CRIP3Q6Q6R5 217 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 TMEM144Q7Z5S9 345 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 SLC7A5P1Q8MH63 180 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 STPG2Q8N412 459 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 SMR3AQ99954 134 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 SH3BGRL3Q9H299 93 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 IGHV3OR16-12A0A075B7B8 117 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 XKRY2A2RUG3 117 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 SRRM4A7MD48 611 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 C8orf88P0DMB2 117 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 KCNIP4Q6PIL6 250 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 Q6ZRM9 215 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 MANBALQ9NQG1 85 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 PEF1Q9UBV8 284 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 ABCA1O95477 2261 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 C11orf94C9JXX5 98 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 PAGE4O60829 102 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 BLCAPP62952 87 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 HABP2Q14520 560 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 FRZBQ92765 325 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 OR51M1Q9H341 326 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 BIN3Q9NQY0 253 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 CSPG4Q6UVK1 2322 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 IGKV3-20P01619 116 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 IGLV1-47P01700 117 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 GUK1Q16774 197 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 PVRIGQ6DKI7 326 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 RNF125Q96EQ8 232 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 CHRDL1Q9BU40 450 aa7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 GSX1Q9H4S2 264 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 TMA7Q9Y2S6 64 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-219ENST00000495955 FAM157CP0CG43 387 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 TCF23Q7RTU1 214 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 SGMS2Q8NHU3 365 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 SRSF8Q9BRL6 282 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 PRRC2AP48634 2157 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 DNAJC9-AS1A6NH13 148 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 GNG4P50150 75 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 SUMO1P63165 101 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 PSG9Q00887 426 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 GATAD1Q8WUU5 269 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 CIARTQ8N365 385 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms