RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TSPAN5P62079 268 aa10.27□□□□□ -0.77
VARS-228ENST00000495010 DHRS2Q13268 280 aa10.27□□□□□ -0.77
VARS-228ENST00000495010 KCTD21Q4G0X4 260 aa10.27□□□□□ -0.77
VARS-228ENST00000495010 SPINK9Q5DT21 86 aa10.27□□□□□ -0.77
VARS-228ENST00000495010 SOHLH1Q5JUK2 328 aa10.27□□□□□ -0.77
VARS-228ENST00000495010 TBC1D26Q86UD7 250 aa10.27□□□□□ -0.77
VARS-228ENST00000495010 SLC35G3Q8N808 338 aa10.27□□□□□ -0.77
VARS-228ENST00000495010 CORTO00230 105 aa10.26□□□□□ -0.77
VARS-228ENST00000495010 SPARTQ8N0X7 666 aa10.26□□□□□ -0.77
VARS-228ENST00000495010 CSNK1G2-AS1Q8NCQ2 148 aa10.26□□□□□ -0.77
VARS-228ENST00000495010 MRGPRFQ96AM1 343 aa10.26□□□□□ -0.77
VARS-228ENST00000495010 PDCD10Q9BUL8 212 aa10.26□□□□□ -0.77
VARS-228ENST00000495010 RNF167Q9H6Y7 350 aa10.26□□□□□ -0.77
VARS-228ENST00000495010 MUC4Q99102 2169 aa10.26□□□□□ -0.77
VARS-228ENST00000495010 DNAH6Q9C0G6 4158 aa10.26□□□□□ -0.77
VARS-228ENST00000495010 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
VARS-228ENST00000495010 HELTA6NFD8 242 aa10.25□□□□□ -0.77
VARS-228ENST00000495010 TMEM127O75204 238 aa10.25□□□□□ -0.77
VARS-228ENST00000495010 CRYBB3P26998 211 aa10.25□□□□□ -0.77
VARS-228ENST00000495010 HRH1P35367 487 aa10.25□□□□□ -0.77
VARS-228ENST00000495010 PPP5CP53041 499 aa10.25□□□□□ -0.77
VARS-228ENST00000495010 AP2S1P53680 142 aaPredicted RBP10.25□□□□□ -0.77
VARS-228ENST00000495010 PSMG4Q5JS54 123 aa10.25□□□□□ -0.77
VARS-228ENST00000495010 TMEM69Q5SWH9 247 aa10.25□□□□□ -0.77
VARS-228ENST00000495010 RAB40CQ96S21 281 aa10.25□□□□□ -0.77
VARS-228ENST00000495010 ENY2Q9NPA8 101 aa10.25□□□□□ -0.77
VARS-228ENST00000495010 AGRNO00468 2067 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 CLN5O75503 358 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 SPART-AS1P0CW21 52 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 HLA-DMAP28067 261 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 PRSS3P35030 304 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 OPRK1P41145 380 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 SNRPD3P62318 126 aaKnown RBP10.24□□□□□ -0.77
VARS-228ENST00000495010 UBE2NLQ5JXB2 153 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 DCANP1Q8TF63 244 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 XCL2Q9UBD3 114 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 RAB26Q9ULW5 256 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 ANAPC10Q9UM13 185 aa10.24□□□□□ -0.77
VARS-228ENST00000495010 TRAV30A0A087WSZ9 112 aa10.23□□□□□ -0.77
VARS-228ENST00000495010 IGKV1-39P01597 117 aa10.23□□□□□ -0.77
VARS-228ENST00000495010 IGKV1D-39P04432 117 aa10.23□□□□□ -0.77
VARS-228ENST00000495010 NAT1P18440 290 aa10.23□□□□□ -0.77
VARS-228ENST00000495010 HOXA1P49639 335 aaPredicted RBP10.23□□□□□ -0.77
VARS-228ENST00000495010 EMP1P54849 157 aa10.23□□□□□ -0.77
VARS-228ENST00000495010 TAS2R20P59543 309 aa10.23□□□□□ -0.77
VARS-228ENST00000495010 ZNF575Q86XF7 245 aa10.23□□□□□ -0.77
VARS-228ENST00000495010 CROCCP3Q8IVE0 287 aa10.23□□□□□ -0.77
VARS-228ENST00000495010 SCRT1Q9BWW7 348 aa10.23□□□□□ -0.77
VARS-228ENST00000495010 PLA2G2EQ9NZK7 142 aa10.23□□□□□ -0.77
VARS-228ENST00000495010 TMEM189A5PLL7 270 aa10.22□□□□□ -0.77
VARS-228ENST00000495010 ATG12O94817 140 aa10.22□□□□□ -0.77
VARS-228ENST00000495010 AKR1C2P52895 323 aa10.22□□□□□ -0.77
VARS-228ENST00000495010 IZUMO4Q1ZYL8 232 aa10.22□□□□□ -0.77
VARS-228ENST00000495010 TIGITQ495A1 244 aa10.22□□□□□ -0.77
VARS-228ENST00000495010 OR4X1Q8NH49 305 aa10.22□□□□□ -0.77
VARS-228ENST00000495010 FAM210BQ96KR6 192 aa10.22□□□□□ -0.77
VARS-228ENST00000495010 RYR1P21817 5038 aa10.21□□□□□ -0.77
VARS-228ENST00000495010 INS-IGF2F8WCM5 200 aa10.21□□□□□ -0.77
VARS-228ENST00000495010 HNRNPCP07910 306 aaKnown RBP eCLIP10.21□□□□□ -0.77
VARS-228ENST00000495010 RNASE2P10153 161 aaKnown RBP10.21□□□□□ -0.77
VARS-228ENST00000495010 ETV6P41212 452 aa10.21□□□□□ -0.77
VARS-228ENST00000495010 LYSMD2Q8IV50 215 aa10.21□□□□□ -0.77
VARS-228ENST00000495010 SAMD12Q8N8I0 201 aa10.21□□□□□ -0.77
VARS-228ENST00000495010 Q8WTZ3 238 aa10.21□□□□□ -0.77
VARS-228ENST00000495010 IGHV3OR16-12A0A075B7B8 117 aa10.2□□□□□ -0.78
VARS-228ENST00000495010 TEX48A0A1B0GUV7 120 aa10.2□□□□□ -0.78
VARS-228ENST00000495010 RPS10-NUDT3A0A1W2PQS6 291 aa10.2□□□□□ -0.78
VARS-228ENST00000495010 CD74P04233 296 aa10.2□□□□□ -0.78
VARS-228ENST00000495010 PGAM2P15259 253 aa10.2□□□□□ -0.78
VARS-228ENST00000495010 RPL5P46777 297 aaKnown RBP10.2□□□□□ -0.78
VARS-228ENST00000495010 UCP3P55916 312 aa10.2□□□□□ -0.78
VARS-228ENST00000495010 MLANAQ16655 118 aa10.2□□□□□ -0.78
VARS-228ENST00000495010 C1orf134Q5TEV5 83 aa10.2□□□□□ -0.78
VARS-228ENST00000495010 C16orf54Q6UWD8 224 aa10.2□□□□□ -0.78
VARS-228ENST00000495010 Q6ZRM9 215 aa10.2□□□□□ -0.78
VARS-228ENST00000495010 FNDC4Q9H6D8 234 aaPredicted RBP10.2□□□□□ -0.78
VARS-228ENST00000495010 MRPL36Q9P0J6 103 aaKnown RBP10.2□□□□□ -0.78
VARS-228ENST00000495010 A0A0B4J293 547 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 SMIM9A6NGZ8 99 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 FAM90A26D6RGX4 464 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 H3BMM0 161 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 HTN3P15516 51 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 RNF212Q495C1 297 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 Q6ZR54 194 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 OR1S2Q8NGQ3 325 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 RNASE11Q8TAA1 199 aaKnown RBP10.19□□□□□ -0.78
VARS-228ENST00000495010 GLMPQ8WWB7 406 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 NEU1Q99519 415 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 YTHDF1Q9BYJ9 559 aaKnown RBP10.19□□□□□ -0.78
VARS-228ENST00000495010 KRTAP4-5Q9BYR2 181 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 FAT2Q9NYQ8 4349 aa10.19□□□□□ -0.78
VARS-228ENST00000495010 SMIM31A0A1B0GVY4 71 aa10.18□□□□□ -0.78
VARS-228ENST00000495010 IGKV1-17P01599 117 aa10.18□□□□□ -0.78
VARS-228ENST00000495010 IGKV1-5P01602 117 aa10.18□□□□□ -0.78
VARS-228ENST00000495010 TRIM16LQ309B1 348 aa10.18□□□□□ -0.78
VARS-228ENST00000495010 RRNAD1Q96FB5 475 aaKnown RBP10.18□□□□□ -0.78
VARS-228ENST00000495010 NIPSNAP3BQ9BS92 247 aa10.18□□□□□ -0.78
VARS-228ENST00000495010 Q9H521 79 aa10.18□□□□□ -0.78
VARS-228ENST00000495010 SEPSECSQ9HD40 501 aaKnown RBP10.18□□□□□ -0.78
VARS-228ENST00000495010 NRN1Q9NPD7 142 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms