RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 C3orf85A0A1B0GTC6 90 aa16.09■□□□□ 0.17
HDDC3-203ENST00000494993 A0A1W2PS18 150 aa16.09■□□□□ 0.17
HDDC3-203ENST00000494993 FAM25AB3EWG3 89 aa16.09■□□□□ 0.17
HDDC3-203ENST00000494993 FAM25CB3EWG5 89 aa16.09■□□□□ 0.17
HDDC3-203ENST00000494993 FAM25GB3EWG6 89 aa16.09■□□□□ 0.17
HDDC3-203ENST00000494993 CLN5O75503 358 aa16.09■□□□□ 0.17
HDDC3-203ENST00000494993 CD3DP04234 171 aa16.09■□□□□ 0.17
HDDC3-203ENST00000494993 ETV6P41212 452 aa16.09■□□□□ 0.17
HDDC3-203ENST00000494993 K7EQG2 157 aa16.08■□□□□ 0.16
HDDC3-203ENST00000494993 OPRK1P41145 380 aa16.08■□□□□ 0.16
HDDC3-203ENST00000494993 PPP5CP53041 499 aa16.08■□□□□ 0.16
HDDC3-203ENST00000494993 TCTAP57738 103 aa16.08■□□□□ 0.16
HDDC3-203ENST00000494993 TRIM16LQ309B1 348 aa16.08■□□□□ 0.16
HDDC3-203ENST00000494993 Q8NAQ8 132 aa16.08■□□□□ 0.16
HDDC3-203ENST00000494993 STXBP6Q8NFX7 210 aa16.08■□□□□ 0.16
HDDC3-203ENST00000494993 OR4X1Q8NH49 305 aa16.08■□□□□ 0.16
HDDC3-203ENST00000494993 METTL26Q96S19 204 aa16.08■□□□□ 0.16
HDDC3-203ENST00000494993 ENY2Q9NPA8 101 aa16.08■□□□□ 0.16
HDDC3-203ENST00000494993 TBPP20226 339 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 CRYBB3P26998 211 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 RPL5P46777 297 aaKnown RBP16.07■□□□□ 0.16
HDDC3-203ENST00000494993 RORCP51449 518 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 MLANAQ16655 118 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 SP6Q3SY56 376 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 MZT2AQ6P582 158 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 TRPT1Q86TN4 253 aaKnown RBP16.07■□□□□ 0.16
HDDC3-203ENST00000494993 CCDC71LQ8N9Z2 235 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 OR52I2Q8NH67 350 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 GRAMD2BQ96HH9 432 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 COPZ2Q9P299 210 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 HERC2O95714 4834 aa16.07■□□□□ 0.16
HDDC3-203ENST00000494993 HECTD4Q9Y4D8 3996 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 A0A0G2JRQ6 117 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 SCGB2A1O75556 95 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 GIG44P09565 113 aaPredicted RBP16.06■□□□□ 0.16
HDDC3-203ENST00000494993 UCP1P25874 307 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 P2RY1P47900 373 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 PRR20EP86478 221 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 PRR20CP86479 221 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 PRR20DP86480 221 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 PRR20BP86481 221 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 PRR20AP86496 221 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 BSXQ3C1V8 233 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 TMEM41BQ5BJD5 291 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 ZFAND1Q8TCF1 268 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 TMEM230Q96A57 120 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 RRNAD1Q96FB5 475 aaKnown RBP16.06■□□□□ 0.16
HDDC3-203ENST00000494993 HRH4Q9H3N8 390 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 MTFP1Q9UDX5 166 aa16.06■□□□□ 0.16
HDDC3-203ENST00000494993 C11orf94C9JXX5 98 aa16.05■□□□□ 0.16
HDDC3-203ENST00000494993 ZNF688P0C7X2 276 aa16.05■□□□□ 0.16
HDDC3-203ENST00000494993 SPP1P10451 314 aa16.05■□□□□ 0.16
HDDC3-203ENST00000494993 RNASE11Q8TAA1 199 aaKnown RBP16.05■□□□□ 0.16
HDDC3-203ENST00000494993 NARS2Q96I59 477 aaKnown RBP16.05■□□□□ 0.16
HDDC3-203ENST00000494993 IGHV4-28A0A0C4DH34 117 aa16.04■□□□□ 0.16
HDDC3-203ENST00000494993 IGKV1-17P01599 117 aa16.04■□□□□ 0.16
HDDC3-203ENST00000494993 TIGITQ495A1 244 aa16.04■□□□□ 0.16
HDDC3-203ENST00000494993 MORN3Q6PF18 240 aaPredicted RBP16.04■□□□□ 0.16
HDDC3-203ENST00000494993 OR4D10Q8NGI6 311 aa16.04■□□□□ 0.16
HDDC3-203ENST00000494993 OR13C8Q8NGS7 320 aa16.04■□□□□ 0.16
HDDC3-203ENST00000494993 TERB2Q8NHR7 220 aa16.04■□□□□ 0.16
HDDC3-203ENST00000494993 AP3S1Q92572 193 aa16.04■□□□□ 0.16
HDDC3-203ENST00000494993 EXTL2Q9UBQ6 330 aa16.04■□□□□ 0.16
HDDC3-203ENST00000494993 APLNQ9ULZ1 77 aa16.04■□□□□ 0.16
HDDC3-203ENST00000494993 TRAV30A0A087WSZ9 112 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 KNCNA6PVL3 124 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 IGLL5B9A064 214 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 B3GALNT1O75752 331 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 CD74P04233 296 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 RBMY1A1P0DJD3 496 aaKnown RBP16.03■□□□□ 0.16
HDDC3-203ENST00000494993 RBMY1CP0DJD4 496 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 MIFP14174 115 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 C4BPBP20851 252 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 RBMY1FQ15415 496 aaKnown RBP16.03■□□□□ 0.16
HDDC3-203ENST00000494993 Q6ZRM9 215 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 DCANP1Q8TF63 244 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 ABHD1Q96SE0 405 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 KRTAP17-1Q9BYP8 105 aa16.03■□□□□ 0.16
HDDC3-203ENST00000494993 RPS10-NUDT3A0A1W2PQS6 291 aa16.02■□□□□ 0.16
HDDC3-203ENST00000494993 ZNF705EA8MWA4 302 aaPredicted RBP16.02■□□□□ 0.16
HDDC3-203ENST00000494993 SPCS3P61009 180 aa16.02■□□□□ 0.16
HDDC3-203ENST00000494993 SCGB2B2Q4G0G5 96 aa16.02■□□□□ 0.16
HDDC3-203ENST00000494993 AARDQ4LEZ3 155 aa16.02■□□□□ 0.16
HDDC3-203ENST00000494993 FAM219AQ8IW50 185 aa16.02■□□□□ 0.16
HDDC3-203ENST00000494993 TMEM229BQ8NBD8 167 aa16.02■□□□□ 0.16
HDDC3-203ENST00000494993 MARCH1Q8TCQ1 289 aa16.02■□□□□ 0.16
HDDC3-203ENST00000494993 RAB3DO95716 219 aa16.01■□□□□ 0.15
HDDC3-203ENST00000494993 ZNF182P17025 639 aaPredicted RBP16.01■□□□□ 0.15
HDDC3-203ENST00000494993 HTR2BP41595 481 aa16.01■□□□□ 0.15
HDDC3-203ENST00000494993 TAS2R19P59542 299 aa16.01■□□□□ 0.15
HDDC3-203ENST00000494993 OR52E5Q8NH55 327 aa16.01■□□□□ 0.15
HDDC3-203ENST00000494993 U3KQE9 123 aa16.01■□□□□ 0.15
HDDC3-203ENST00000494993 CDS2O95674 445 aa16■□□□□ 0.15
HDDC3-203ENST00000494993 IGLC1P0CG04 106 aa16■□□□□ 0.15
HDDC3-203ENST00000494993 HLA-DMBP28068 263 aa16■□□□□ 0.15
HDDC3-203ENST00000494993 EIF2B2P49770 351 aaKnown RBP16■□□□□ 0.15
HDDC3-203ENST00000494993 ACTL10Q5JWF8 245 aa16■□□□□ 0.15
HDDC3-203ENST00000494993 OR1S2Q8NGQ3 325 aa16■□□□□ 0.15
HDDC3-203ENST00000494993 C15orf40Q8WUR7 153 aa16■□□□□ 0.15
HDDC3-203ENST00000494993 NAA50Q9GZZ1 169 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms