RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TRGV5A0A0B4J1U4 118 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 OR5H14A6NHG9 310 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 B4DEV8 164 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 C3orf84H3BNL1 204 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 CCL22O00626 93 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 UBFD1O14562 309 aaKnown RBP2.03□□□□□ -2.08
SMC4-224ENST00000494612 NSA2O95478 260 aaKnown RBP2.03□□□□□ -2.08
SMC4-224ENST00000494612 SERPINA6P08185 405 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 CXCL3P19876 107 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 PSMA1P25786 263 aaKnown RBP2.03□□□□□ -2.08
SMC4-224ENST00000494612 CNTFRP26992 372 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 RPL12P30050 165 aaKnown RBP2.03□□□□□ -2.08
SMC4-224ENST00000494612 EVI2BP34910 448 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 DYNLT1P63172 113 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 HPCAP84074 193 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 FADDQ13158 208 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 DHRS2Q13268 280 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 TMED2Q15363 201 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 IMPG1Q17R60 797 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 TRMT12Q53H54 448 aaKnown RBP2.03□□□□□ -2.08
SMC4-224ENST00000494612 TNFAIP8L2Q6P589 184 aaPredicted RBP2.03□□□□□ -2.08
SMC4-224ENST00000494612 Q6ZQT7 251 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 SLC51BQ86UW2 128 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 LYPD6Q86Y78 171 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 HS3ST5Q8IZT8 346 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 OR8K1Q8NGG5 319 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 OR9I1Q8NGQ6 314 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 OR10D3Q8NH80 312 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 TNFAIP8L1Q8WVP5 186 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 TSLPQ969D9 159 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 APOBEC3DQ96AK3 386 aaPredicted RBP2.03□□□□□ -2.08
SMC4-224ENST00000494612 RAD51AP1Q96B01 352 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 CHMP6Q96FZ7 201 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 EBNA1BP2Q99848 306 aaKnown RBP2.03□□□□□ -2.08
SMC4-224ENST00000494612 TTTY12Q9BZ98 90 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 OR51V1Q9H2C8 321 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 HRASLSQ9HDD0 168 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 KCNIP2Q9NS61 270 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 OR5V1Q9UGF6 321 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 LINC00527Q9UJ94 153 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 ALG5Q9Y673 324 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 COL6A5A8TX70 2615 aa2.03□□□□□ -2.09
SMC4-224ENST00000494612 CNTRLQ7Z7A1 2325 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 A0A0G2JMM0 328 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 A0A1W2PPB8 328 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 A0A1W2PRS3 328 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 ZNF860A6NHJ4 632 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 TMEM210A6NLX4 147 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 KIR3DP1A8MWS1 328 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 TMEM250H0YL14 139 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 PSMD12O00232 456 aaPredicted RBP2.02□□□□□ -2.09
SMC4-224ENST00000494612 DCTN3O75935 186 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 OR2J2O76002 312 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 RPP14O95059 124 aaKnown RBP2.02□□□□□ -2.09
SMC4-224ENST00000494612 OR4A8P0C604 315 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 ORM2P19652 201 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 CXCL2P19875 107 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 KDELR1P24390 212 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 MSNP26038 577 aaKnown RBP2.02□□□□□ -2.09
SMC4-224ENST00000494612 CCR7P32248 378 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 OPRM1P35372 400 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 ZNF140P52738 457 aaPredicted RBP2.02□□□□□ -2.09
SMC4-224ENST00000494612 H2BFSP57053 126 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 ACTBP60709 375 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 DAD1P61803 113 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 ACTG1P63261 375 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 CTAG1AP78358 180 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 SLC35A2P78381 396 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 DEFA6Q01524 100 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 TNFRSF9Q07011 255 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 CASP8Q14790 479 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 POU6F1Q14863 301 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 MAPK14Q16539 360 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 CCSMST1Q4G0I0 132 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 ACSM3Q53FZ2 586 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 MESTQ5EB52 335 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 SAPCD1Q5SSQ6 148 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 CLVS2Q5SYC1 327 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 C8orf74Q6P047 294 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 SCGB1D4Q6XE38 83 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 VN1R4Q7Z5H5 301 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 NAA40Q86UY6 237 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 ZNF567Q8N184 647 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 KRT222Q8N1A0 295 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 PLPP5Q8NEB5 264 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 BPIFB6Q8NFQ5 453 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 MFSD8Q8NHS3 518 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 SGMS2Q8NHU3 365 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 TLCD1Q96CP7 247 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 MED18Q9BUE0 208 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 REG4Q9BYZ8 158 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 BCL2L14Q9BZR8 327 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 TAS2R9Q9NYW1 312 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 BOKQ9UMX3 212 aaPredicted RBP2.02□□□□□ -2.09
SMC4-224ENST00000494612 HDGFL3Q9Y3E1 203 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 JMJD1CQ15652 2540 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 PRR14LQ5THK1 2151 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 NBEAL1Q6ZS30 2694 aa2.02□□□□□ -2.09
SMC4-224ENST00000494612 IGKV1D-37A0A075B6S9 117 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms