RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 PSMG4Q5JS54 123 aa7□□□□□ -1.29
UBR4-216ENST00000494503 MORN3Q6PF18 240 aaPredicted RBP7□□□□□ -1.29
UBR4-216ENST00000494503 YTHDF1Q9BYJ9 559 aaKnown RBP7□□□□□ -1.29
UBR4-216ENST00000494503 ZFAND3Q9H8U3 227 aa7□□□□□ -1.29
UBR4-216ENST00000494503 DEFB131BA0A096LNP1 70 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 TRAV2A0A0B4J234 112 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 HELTA6NFD8 242 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 TMEM127O75204 238 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 ATG12O94817 140 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 ATP6V1G2O95670 118 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 TMEM50AO95807 157 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 RCVRNP35243 200 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 RPS19P39019 145 aaKnown RBP6.99□□□□□ -1.29
UBR4-216ENST00000494503 EMP1P54849 157 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 PIGPP57054 158 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 TIGITQ495A1 244 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 TRPT1Q86TN4 253 aaKnown RBP6.99□□□□□ -1.29
UBR4-216ENST00000494503 LYSMD2Q8IV50 215 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 UBE2DNLQ8IWF7 75 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 CADM3Q8N126 398 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 RRNAD1Q96FB5 475 aaKnown RBP6.99□□□□□ -1.29
UBR4-216ENST00000494503 HRH4Q9H3N8 390 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 VCX3AQ9NNX9 186 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 ANAPC10Q9UM13 185 aa6.99□□□□□ -1.29
UBR4-216ENST00000494503 IGHV3OR16-12A0A075B7B8 117 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 ELOA3CA0A087WX78 387 aaPredicted RBP6.98□□□□□ -1.29
UBR4-216ENST00000494503 FAM25AB3EWG3 89 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 FAM25CB3EWG5 89 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 FAM25GB3EWG6 89 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 K7EQG2 157 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 CLN5O75503 358 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 NAT1P18440 290 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 PVRIGQ6DKI7 326 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 LINC00336Q6ZUF6 198 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 TP53RKQ96S44 253 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 NDUFAF3Q9BU61 184 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 FAM212BQ9NTI7 297 aaPredicted RBP6.98□□□□□ -1.29
UBR4-216ENST00000494503 COPZ2Q9P299 210 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 XCL2Q9UBD3 114 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 CELA1Q9UNI1 258 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 MUC4Q99102 2169 aa6.98□□□□□ -1.29
UBR4-216ENST00000494503 DNAH10Q8IVF4 4471 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 C3orf85A0A1B0GTC6 90 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 RPS10-NUDT3A0A1W2PQS6 291 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 PRSS29PA6NIE9 313 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 IGKV1-5P01602 117 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 IGKV3-20P01619 116 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 P0DMU3 169 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 FAM231AP0DMU4 169 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 FAM231CP0DMU5 169 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 RNASE2P10153 161 aaKnown RBP6.97□□□□□ -1.29
UBR4-216ENST00000494503 NPY1RP25929 384 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 NUTF2P61970 127 aaKnown RBP6.97□□□□□ -1.29
UBR4-216ENST00000494503 SNRPD3P62318 126 aaKnown RBP6.97□□□□□ -1.29
UBR4-216ENST00000494503 MLANAQ16655 118 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 SP6Q3SY56 376 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 SCGB2B2Q4G0G5 96 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 RNASE10Q5GAN6 216 aaKnown RBP6.97□□□□□ -1.29
UBR4-216ENST00000494503 CCDC71LQ8N9Z2 235 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 GPX8Q8TED1 209 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 RNF126Q9BV68 326 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 SCPEP1Q9HB40 452 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 HEYLQ9NQ87 328 aaPredicted RBP6.97□□□□□ -1.29
UBR4-216ENST00000494503 MRPL36Q9P0J6 103 aaKnown RBP6.97□□□□□ -1.29
UBR4-216ENST00000494503 X6R8D5 127 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 HECTD4Q9Y4D8 3996 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 HERC2O95714 4834 aa6.97□□□□□ -1.29
UBR4-216ENST00000494503 IGLV2-18A0A075B6J9 118 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 TRAV30A0A087WSZ9 112 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 A0A0B4J293 547 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 CEBPZOSA8MTT3 80 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 ZNF705EA8MWA4 302 aaPredicted RBP6.96□□□□□ -1.3
UBR4-216ENST00000494503 HPGDSO60760 199 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 NXPH3O95157 252 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 TNFAIP8O95379 198 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 IFNA10P01566 189 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 IFNA21P01568 189 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 IL4P05112 153 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 HNRNPCP07910 306 aaKnown RBP eCLIP6.96□□□□□ -1.3
UBR4-216ENST00000494503 GIG44P09565 113 aaPredicted RBP6.96□□□□□ -1.3
UBR4-216ENST00000494503 HTN3P15516 51 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 CRYBB3P26998 211 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 RND2P52198 227 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 UCP3P55916 312 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 FXYD7P58549 80 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 OR4X1Q8NH49 305 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 DCANP1Q8TF63 244 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 Q8WTZ3 238 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 ACY3Q96HD9 319 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 RAB40CQ96S21 281 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 C1QTNF4Q9BXJ3 329 aa6.96□□□□□ -1.3
UBR4-216ENST00000494503 FNDC4Q9H6D8 234 aaPredicted RBP6.96□□□□□ -1.3
UBR4-216ENST00000494503 TEX13DA0A0J9YY54 714 aaPredicted RBP6.95□□□□□ -1.3
UBR4-216ENST00000494503 APOA1P02647 267 aa6.95□□□□□ -1.3
UBR4-216ENST00000494503 ELK1P19419 428 aa6.95□□□□□ -1.3
UBR4-216ENST00000494503 OR10J1P30954 320 aa6.95□□□□□ -1.3
UBR4-216ENST00000494503 AP2S1P53680 142 aaPredicted RBP6.95□□□□□ -1.3
UBR4-216ENST00000494503 C12orf74Q32Q52 190 aa6.95□□□□□ -1.3
UBR4-216ENST00000494503 KCTD21Q4G0X4 260 aa6.95□□□□□ -1.3
UBR4-216ENST00000494503 POM121L12Q8N7R1 296 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms