RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 H1FOOQ8IZA3 346 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-219ENST00000494323 SLC38A6Q8IZM9 456 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 C8orf59Q8N0T1 100 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-219ENST00000494323 OR56B1Q8NGI3 324 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 OR1L6Q8NGR2 347 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 OR5B3Q8NH48 314 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 EEF1AKMT3Q96AZ1 226 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 RAB3CQ96E17 227 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 MRPL53Q96EL3 112 aaKnown RBP3.77□□□□□ -1.81
PTCD3-219ENST00000494323 ADTRPQ96IZ2 230 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 CABLES2Q9BTV7 478 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 SLC2A9Q9NRM0 540 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 PLCXD1Q9NUJ7 323 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 FKBP14Q9NWM8 211 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 RAB22AQ9UL26 194 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 SPATA2Q9UM82 520 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 ZNF257Q9Y2Q1 563 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 AGRNO00468 2067 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 IGHV3-21A0A0B4J1V1 117 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 TRAV25A0A0B4J276 109 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 IGKV1D-13A0A0B4J2D9 117 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 A0A0U1RRA0 63 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 DEFB4AO15263 64 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 ZNF207O43670 478 aaKnown RBP3.76□□□□□ -1.81
PTCD3-219ENST00000494323 S1PR2O95136 353 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 CDK1P06493 297 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 CRYGCP07315 174 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 ZNF735P0CB33 412 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 C8orf88P0DMB2 117 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 IGKV1-13P0DP09 117 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 CTRB1P17538 263 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 PSMB6P28072 239 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 FCGR2BP31994 310 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-219ENST00000494323 GPR183P32249 361 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 TALDO1P37837 337 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 RPL27AP46776 148 aaKnown RBP3.76□□□□□ -1.81
PTCD3-219ENST00000494323 PSMD7P51665 324 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 APOC4P55056 127 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 XGP55808 180 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 RPS25P62851 125 aaKnown RBP3.76□□□□□ -1.81
PTCD3-219ENST00000494323 ARFRP1Q13795 201 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 FFAR4Q5NUL3 377 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 CTRB2Q6GPI1 263 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 PLET1Q6UQ28 207 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 Q6ZTC4 211 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 APRG1Q8IVJ8 170 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 OR10R2Q8NGX6 335 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 OR2A7Q96R45 310 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 SPAG8Q99932 426 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-219ENST00000494323 MND1Q9BWT6 205 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 GPN1Q9HCN4 374 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-219ENST00000494323 MRPL27Q9P0M9 148 aaKnown RBP3.76□□□□□ -1.81
PTCD3-219ENST00000494323 TP53TG1Q9Y2A0 90 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 LSM2Q9Y333 95 aaKnown RBP3.76□□□□□ -1.81
PTCD3-219ENST00000494323 RBMX2Q9Y388 322 aaKnown RBP3.76□□□□□ -1.81
PTCD3-219ENST00000494323 PRELID3BQ9Y3B1 194 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 V9GY05 133 aa3.76□□□□□ -1.81
PTCD3-219ENST00000494323 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 IGKV3-7A0A075B6H7 116 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 IGLV11-55A0A075B6I3 123 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 TRBV7-1A0A0A6YYK4 115 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 TRAV3A0A0B4J244 114 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 OR2T8A6NH00 312 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 A8MWP6 167 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 TNFSF12O43508 249 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 CREBL2O60519 120 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-219ENST00000494323 ATP6V1G1O75348 118 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 KBTBD11O94819 623 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 DHFRP00374 187 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 IFNA4P05014 189 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 CFC1BP0CG36 223 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 CFC1P0CG37 223 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 HIST1H1DP16402 221 aaKnown RBP3.75□□□□□ -1.81
PTCD3-219ENST00000494323 GADD45AP24522 165 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 MAS1LP35410 378 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 OR10A3P58181 314 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 RPL8P62917 257 aaKnown RBP3.75□□□□□ -1.81
PTCD3-219ENST00000494323 HERV-K104P63124 156 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 FABP5Q01469 135 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 CDNFQ49AH0 187 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 Q6ZVQ6 151 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 PUSL1Q8N0Z8 303 aaKnown RBP3.75□□□□□ -1.81
PTCD3-219ENST00000494323 ZNF645Q8N7E2 425 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 OR10W1Q8NGF6 305 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 C11orf45Q8TAV5 145 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 TMEM167AQ8TBQ9 72 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 ZNF502Q8TBZ5 544 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 TCTEX1D2Q8WW35 142 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 UFD1Q92890 307 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 ZNF486Q96H40 463 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-219ENST00000494323 LITAFQ99732 161 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 RARRES2Q99969 163 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 C20orf24Q9BUV8 137 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 ATG5Q9H1Y0 275 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 VCX3BQ9H321 246 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 HRASLSQ9HDD0 168 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 TAS2R8Q9NYW2 309 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 NDUFA13Q9P0J0 144 aa3.75□□□□□ -1.81
PTCD3-219ENST00000494323 MRPS7Q9Y2R9 242 aaKnown RBP3.75□□□□□ -1.81
PTCD3-219ENST00000494323 UFC1Q9Y3C8 167 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms