RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, human

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-223	ENST00000494123	TSPAN15	O95858	294 aa		11.24	□□□□□ -0.61
BRCA1-223	ENST00000494123	TRBV12-3	P01733	135 aa		11.24	□□□□□ -0.61
BRCA1-223	ENST00000494123	CLEC3B	P05452	202 aa		11.24	□□□□□ -0.61
BRCA1-223	ENST00000494123	GPR183	P32249	361 aa		11.24	□□□□□ -0.61
BRCA1-223	ENST00000494123	ARL3	P36405	182 aa		11.24	□□□□□ -0.61
BRCA1-223	ENST00000494123	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.24	□□□□□ -0.61
BRCA1-223	ENST00000494123	OR2T8	A6NH00	312 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123		E5RGE8	158 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	PPP5D1	E7EU14	171 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	GNG7	O60262	68 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	MPC2	O95563	127 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	GIP	P09681	153 aa	Predicted RBP	11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	SLC25A4	P12235	298 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	NPBWR1	P48145	328 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	CD69	Q07108	199 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	OR8G2P	Q6IF36	304 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	SLC16A13	Q7RTY0	426 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	ATP6V0B	Q99437	205 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	TXN2	Q99757	166 aa		11.23	□□□□□ -0.61
BRCA1-223	ENST00000494123	METTL15P1	P0C7V9	234 aa		11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	ZP3	P21754	424 aa		11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	RAP2B	P61225	183 aa		11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	FHL3	Q13643	280 aa		11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	MLANA	Q16655	118 aa		11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	RPEL1	Q2QD12	228 aa		11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	TMEM14EP	Q6UXP3	125 aa		11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	BSCL2	Q96G97	398 aa	Predicted RBP	11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	SLC35E1	Q96K37	410 aa		11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	ZC4H2	Q9NQZ6	224 aa		11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	LYRM2	Q9NU23	88 aa	Predicted RBP	11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	OR5AC2	Q9NZP5	309 aa		11.22	□□□□□ -0.61
BRCA1-223	ENST00000494123	hCG_2014768	A0A024R1R8	64 aa		11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	BMPR1B	O00238	502 aa		11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	TGOLN2	O43493	480 aa		11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	GGCT	O75223	188 aa	Known RBP	11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	SCGB2A1	O75556	95 aa		11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	FCGR2B	P31994	310 aa	Predicted RBP	11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	GPX4	P36969	197 aa	Predicted RBP	11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	FGL1	Q08830	312 aa		11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	THAP6	Q8TBB0	222 aa		11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	ACY3	Q96HD9	319 aa		11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	C11orf1	Q9H5F2	150 aa		11.21	□□□□□ -0.61
BRCA1-223	ENST00000494123	FAM24A	A6NFZ4	105 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	NUPL2	O15504	423 aa	Known RBP	11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	SCAF4	O95104	1147 aa	Known RBP	11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	HOXD3	P31249	432 aa	Predicted RBP	11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	P2RY1	P47900	373 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	RND2	P52198	227 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	SLURP1	P55000	103 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	ANK2	Q01484	3957 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	PRSS54	Q6PEW0	395 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	SPSB3	Q6PJ21	355 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	STX12	Q86Y82	276 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	OR10P1	Q8NGE3	313 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	OR4X1	Q8NH49	305 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	CACNG8	Q8WXS5	425 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	DCUN1D4	Q92564	292 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	WNK1	Q9H4A3	2382 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123		F8W735	103 aa	Predicted RBP	11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123		H0YIZ8	118 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	CLN5	O75503	358 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	SLC25A31	Q9H0C2	315 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	MRPL36	Q9P0J6	103 aa	Known RBP	11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	MBD2	Q9UBB5	411 aa		11.2	□□□□□ -0.62
BRCA1-223	ENST00000494123	SMCO3	A2RU48	225 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	CCNK	O75909	580 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	CST7	O76096	145 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	OR2C1	O95371	312 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	CD33	P20138	364 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	SULT1A1	P50225	295 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	ACOT7L	Q6ZUV0	252 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	TMEM252	Q8N6L7	170 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	LINC00482	Q8N8I6	264 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	TMEM116	Q8NCL8	245 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	OR2T35	Q8NGX2	323 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	RNF126	Q9BV68	326 aa		11.19	□□□□□ -0.62
BRCA1-223	ENST00000494123	TRAV30	A0A087WSZ9	112 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	IGSF23	A1L1A6	192 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	PMS2P5	A8MQ11	134 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	PRSS46	E5RG02	174 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	CTSG	P08311	255 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	HBG1	P69891	147 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	HBG2	P69892	147 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	AKR1C1	Q04828	323 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	GAMT	Q14353	236 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	TMEM217	Q8N7C4	229 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	CHAC2	Q8WUX2	184 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	NPIPB3	Q92617	1050 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	CHRDL1	Q9BU40	450 aa		11.18	□□□□□ -0.62
BRCA1-223	ENST00000494123	TRAV14DV4	A0A0A6YYC5	116 aa		11.17	□□□□□ -0.62
BRCA1-223	ENST00000494123	IGHV3-35	A0A0C4DH35	117 aa		11.17	□□□□□ -0.62
BRCA1-223	ENST00000494123	OR10J1	P30954	320 aa		11.17	□□□□□ -0.62
BRCA1-223	ENST00000494123	ADM	P35318	185 aa		11.17	□□□□□ -0.62
BRCA1-223	ENST00000494123	SYNJ2BP	P57105	145 aa		11.17	□□□□□ -0.62
BRCA1-223	ENST00000494123	DLK1	P80370	383 aa		11.17	□□□□□ -0.62
BRCA1-223	ENST00000494123	REL	Q04864	619 aa	Predicted RBP	11.17	□□□□□ -0.62
BRCA1-223	ENST00000494123	SLC38A11	Q08AI6	406 aa		11.17	□□□□□ -0.62
BRCA1-223	ENST00000494123	FAM106A	Q4KMX7	169 aa		11.17	□□□□□ -0.62
BRCA1-223	ENST00000494123	LILRB2	Q8N423	598 aa		11.17	□□□□□ -0.62
BRCA1-223	ENST00000494123	DLX4	Q92988	240 aa	Predicted RBP	11.17	□□□□□ -0.62

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