RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 MLANAQ16655 118 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 C9orf152Q5JTZ5 239 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 ETFRF1Q6IPR1 90 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 ALKAL2Q6UX46 152 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 RBMS3Q6XE24 437 aaKnown RBP9.9□□□□□ -0.82
VPS52-220ENST00000493674 HSD17B11Q8NBQ5 300 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 TMEM116Q8NCL8 245 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 OR5T1Q8NG75 326 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 OR2G3Q8NGZ4 309 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 TMED6Q8WW62 240 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 GNPNAT1Q96EK6 184 aaPredicted RBP9.9□□□□□ -0.82
VPS52-220ENST00000493674 MISP3Q96FF7 219 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 NPCDR1Q9BY65 106 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 PRSS22Q9GZN4 317 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 TNFRSF19Q9NS68 423 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 UBQLN2Q9UHD9 624 aa9.9□□□□□ -0.82
VPS52-220ENST00000493674 ATRQ13535 2644 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 RPS10-NUDT3A0A1W2PQS6 291 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 H3BUA1 57 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 CYB5BO43169 146 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 MT-CO2P00403 227 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 IGLV1-40P01703 118 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 PRH1P02810 166 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 RNASE1P07998 156 aaKnown RBP9.89□□□□□ -0.83
VPS52-220ENST00000493674 DEFA4P12838 97 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 FGF7P21781 194 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 FCGR2BP31994 310 aaPredicted RBP9.89□□□□□ -0.83
VPS52-220ENST00000493674 EIF5AL1Q6IS14 154 aaKnown RBP9.89□□□□□ -0.83
VPS52-220ENST00000493674 SLC25A24Q6NUK1 477 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 BTNL8Q6UX41 500 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 OR2T6Q8NHC8 308 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 SLC35E1Q96K37 410 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 MGST2Q99735 147 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 GGTLC1Q9BX51 225 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 SLC25A32Q9H2D1 315 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 RFNGQ9Y644 331 aa9.89□□□□□ -0.83
VPS52-220ENST00000493674 IGKV1D-37A0A075B6S9 117 aa9.88□□□□□ -0.83
VPS52-220ENST00000493674 SULT1A2P50226 295 aa9.88□□□□□ -0.83
VPS52-220ENST00000493674 AKR1C1Q04828 323 aa9.88□□□□□ -0.83
VPS52-220ENST00000493674 TMEM95Q3KNT9 176 aa9.88□□□□□ -0.83
VPS52-220ENST00000493674 TEPPQ6URK8 271 aa9.88□□□□□ -0.83
VPS52-220ENST00000493674 OR4X1Q8NH49 305 aa9.88□□□□□ -0.83
VPS52-220ENST00000493674 SCGB1C1Q8TD33 95 aa9.88□□□□□ -0.83
VPS52-220ENST00000493674 ZNF418Q8TF45 676 aaPredicted RBP9.88□□□□□ -0.83
VPS52-220ENST00000493674 NOL4LQ96MY1 436 aaPredicted RBP9.88□□□□□ -0.83
VPS52-220ENST00000493674 DUX5Q96PT3 197 aa9.88□□□□□ -0.83
VPS52-220ENST00000493674 RSG1Q9BU20 258 aa9.88□□□□□ -0.83
VPS52-220ENST00000493674 SMCO3A2RU48 225 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 TMEM89A2RUT3 159 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 F8W735 103 aaPredicted RBP9.87□□□□□ -0.83
VPS52-220ENST00000493674 TRIM77I1YAP6 450 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 NDUFB8O95169 186 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 RND2P52198 227 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 SERF2P84101 59 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 FAM74A1Q5RGS3 127 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 NECAP1Q8NC96 275 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 VN1R17PQ8TDU5 208 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 SERTAD4Q9NUC0 356 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 THYN1Q9P016 225 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 LINC00527Q9UJ94 153 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 SLC45A2Q9UMX9 530 aa9.87□□□□□ -0.83
VPS52-220ENST00000493674 FAM181BA6NEQ2 426 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 MFSD2BA6NFX1 497 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 FAM223BA6NKX1 122 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 UMAD1C9J7I0 102 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 AGPAT2O15120 278 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 OR2J3O76001 311 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 IGHV3-48P01763 117 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 IGHG4P01861 327 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 NMBP08949 121 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 CAMLGP49069 296 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 RHOGP84095 191 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 PRR20EP86478 221 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 PRR20CP86479 221 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 PRR20DP86480 221 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 PRR20BP86481 221 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 PRR20AP86496 221 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 CLLU1Q5K131 121 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 ACSM6Q6P461 480 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 Q6ZSV7 163 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 FAM223AQ8IWN6 122 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 ZNF502Q8TBZ5 544 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 NPIPB3Q92617 1050 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 ACY3Q96HD9 319 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 ATP6V0BQ99437 205 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 TRGV9Q99603 122 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 KCNIP2Q9NS61 270 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 FBXL7Q9UJT9 491 aa9.86□□□□□ -0.83
VPS52-220ENST00000493674 C17orf112F2Z3M2 114 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 CLN5O75503 358 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 LINC00869P0C866 280 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 IGLC1P0CG04 106 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 PSMB8P28062 276 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 OR10J1P30954 320 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 RPL29P47914 159 aaKnown RBP9.85□□□□□ -0.83
VPS52-220ENST00000493674 RAB5CP51148 216 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 RNF152Q8N8N0 203 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 LRRC20Q8TCA0 184 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 MYOZ3Q8TDC0 251 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 WIPF2Q8TF74 440 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms