RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 NCOR1P1Q9H4R4 102 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 DUSP21Q9H596 190 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 PLEKHA3Q9HB20 300 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 ACOT13Q9NPJ3 140 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 CCL28Q9NRJ3 127 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF355PQ9NSJ1 428 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 SDHAF2Q9NX18 166 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 RDH8Q9NYR8 311 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 TAS2R8Q9NYW2 309 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 METTL1Q9UBP6 276 aaKnown RBP2.08□□□□□ -2.08
PTCD3-218ENST00000493430 GLS2Q9UI32 602 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 PITPNC1Q9UKF7 332 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 AMMECR1Q9Y4X0 333 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-218ENST00000493430 SACSQ9NZJ4 4579 aa2.08□□□□□ -2.08
PTCD3-218ENST00000493430 EPPK1P58107 5090 aaKnown RBP2.08□□□□□ -2.08
PTCD3-218ENST00000493430 IGHV3OR16-13A0A075B7E8 117 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 IGHV3-74A0A0B4J1X5 117 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 MFSD2BA6NFX1 497 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 I3L521 148 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 FABP7O15540 132 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 DENRO43583 198 aaKnown RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 ORC5O43913 435 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 OR2J3O76001 311 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 NDUFA3O95167 84 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 BRI3O95415 125 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 IGHG4P01861 327 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 TRGV3P03979 118 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 ALDOBP05062 364 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 EIF4EP06730 217 aaKnown RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 CD7P09564 240 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 SAA1P0DJI8 122 aaPredicted RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 SRMP19623 302 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 FUT3P21217 361 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 VDAC1P21796 283 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 SDC2P34741 201 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 TAGLN2P37802 199 aaKnown RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 CEACAM6P40199 344 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 RAB7AP51149 207 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF137PP52743 207 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 MFAP2P55001 183 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 ATP5IP56385 69 aaPredicted RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 SYNJ2BPP57105 145 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 NCS1P62166 190 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 EGFEM1PQ0D2K5 195 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 MLLT11Q13015 90 aaPredicted RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 ARFRP1Q13795 201 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 EBI3Q14213 229 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 TNXAQ16473 311 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 AANATQ16613 207 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 LRRC37A5PQ49AS3 106 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 CCDC58Q4VC31 144 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 C6orf183Q5T699 404 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 IDNKQ5T6J7 187 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 TMEM17Q86X19 198 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 CDH26Q8IXH8 852 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 LINC00311Q8N616 119 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 PACRGLQ8N7B6 248 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 WFDC9Q8NEX5 89 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 OR10W1Q8NGF6 305 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 OR1N2Q8NGR9 330 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 MYOZ3Q8TDC0 251 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 HAVCR2Q8TDQ0 301 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 PCNPQ8WW12 178 aaKnown RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 ACOT12Q8WYK0 555 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 RCHY1Q96PM5 261 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 CMSS1Q9BQ75 279 aaKnown RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 AGMATQ9BSE5 352 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 TOLLIPQ9H0E2 274 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 ATG5Q9H1Y0 275 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 AUNIPQ9H7T9 357 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF430Q9H8G1 570 aaPredicted RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 LINC00574Q9H8X3 128 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 RAB18Q9NP72 206 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 PLEKHJ1Q9NW61 149 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 TXNL4BQ9NX01 149 aaKnown RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 NDUFB11Q9NX14 153 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 COA4Q9NYJ1 87 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 TECRQ9NZ01 308 aaKnown RBP2.07□□□□□ -2.08
PTCD3-218ENST00000493430 CKLFQ9UBR5 152 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 JPT1Q9UK76 154 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 ERGIC3Q9Y282 383 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 WASHC3Q9Y3C0 194 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 DNAH7Q8WXX0 4024 aa2.07□□□□□ -2.08
PTCD3-218ENST00000493430 IGKV3-7A0A075B6H7 116 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 IGHV3-66A0A0C4DH42 116 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 FUOMA2VDF0 154 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 RNF222A6NCQ9 220 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 SNTNA6NMZ2 147 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 IFITM5A6NNB3 132 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 H3BTX0 84 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 SULT1C2O00338 296 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 OVOL1O14753 267 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 FGF16O43320 207 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 YPEL1O60688 119 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 HLA-DRB1P01911 266 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 CRYGBP07316 175 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 LGALS1P09382 135 aaKnown RBP2.06□□□□□ -2.08
PTCD3-218ENST00000493430 OR9G9P0C7N8 305 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 HIST1H1DP16402 221 aaKnown RBP2.06□□□□□ -2.08
PTCD3-218ENST00000493430 IL3RAP26951 378 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms