RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 HSPB7Q9UBY9 170 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 FLVCR2Q9UPI3 526 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 NSG2Q9Y328 171 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 TMED3Q9Y3Q3 217 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 F11RQ9Y624 299 aaKnown RBP5.16□□□□□ -1.58
VPS52-219ENST00000493379 TRBV7-1A0A0A6YYK4 115 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 FAM90A26D6RGX4 464 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 ST8SIA3O43173 380 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 IL5P05113 134 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 OR4E1P0C645 316 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 OR8U8P0C7N1 319 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 OR13C7P0DN81 318 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 INPP1P49441 399 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 TPPP2P59282 170 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 RHOGP84095 191 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 ATP5G2Q06055 141 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 ZNF616Q08AN1 781 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 EGFEM1PQ0D2K5 195 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 DHRS2Q13268 280 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 IZUMO4Q1ZYL8 232 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 TMEM268Q5VZI3 342 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 LYG2Q86SG7 212 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 GPHB5Q86YW7 130 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 CXorf58Q96LI9 332 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 MS4A10Q96PG2 267 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 PHB2Q99623 299 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 MARVELD1Q9BSK0 173 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 MCRIP2Q9BUT9 160 aaKnown RBP5.15□□□□□ -1.59
VPS52-219ENST00000493379 THYN1Q9P016 225 aa5.15□□□□□ -1.59
VPS52-219ENST00000493379 PEF1Q9UBV8 284 aaKnown RBP5.15□□□□□ -1.59
VPS52-219ENST00000493379 IGHV4OR15-8A0A075B7B6 117 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 A0A087WW49 117 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 C13orf42A0A1B0GVH6 325 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 LINC01619G3V211 115 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 I3L2K1 104 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 K7EIM0 57 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 LGALS9O00182 355 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 CYB5BO43169 146 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 NDUFB8O95169 186 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 SULT1A3P0DMM9 295 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 SULT1A4P0DMN0 295 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 ZP3P21754 424 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 INSL3P51460 131 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 AKR1C2P52895 323 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 ERHP84090 104 aaKnown RBP5.14□□□□□ -1.59
VPS52-219ENST00000493379 TNFRSF9Q07011 255 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 IL15RAQ13261 267 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 SMCO1Q147U7 214 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 C15orf32Q32M92 178 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 C2orf83Q53S99 150 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 MZT2BQ6NZ67 158 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 ACSM6Q6P461 480 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 IL34Q6ZMJ4 242 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 ADAMTSL5Q6ZMM2 481 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 TMED4Q7Z7H5 227 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 ZNF502Q8TBZ5 544 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 CASTOR1Q8WTX7 329 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 DLX4Q92988 240 aaPredicted RBP5.14□□□□□ -1.59
VPS52-219ENST00000493379 ZNF414Q96IQ9 312 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 TXN2Q99757 166 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 ZNF355PQ9NSJ1 428 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 CACNG5Q9UF02 275 aa5.14□□□□□ -1.59
VPS52-219ENST00000493379 FAM240BA0A1B0GVZ2 78 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 K7EIL1 84 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 BMPR1BO00238 502 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 OR2J3O76001 311 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 PRH1P02810 166 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 APELAP0DMC3 54 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 RNASE2P10153 161 aaKnown RBP5.13□□□□□ -1.59
VPS52-219ENST00000493379 ANXA7P20073 488 aaKnown RBP5.13□□□□□ -1.59
VPS52-219ENST00000493379 HOXD3P31249 432 aaPredicted RBP5.13□□□□□ -1.59
VPS52-219ENST00000493379 HTR2BP41595 481 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 RAB25P57735 213 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 GGNBP1Q5YKI7 109 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 FAM90A2PQ658T7 463 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 IL17DQ8TAD2 202 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 SCARB1Q8WTV0 552 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 DCUN1D4Q92564 292 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 GPR61Q9BZJ8 451 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 ZNF436Q9C0F3 470 aaPredicted RBP5.13□□□□□ -1.59
VPS52-219ENST00000493379 C20orf85Q9H1P6 137 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 PALMDQ9NP74 551 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 NUDT15Q9NV35 164 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 U3KQ87 197 aa5.13□□□□□ -1.59
VPS52-219ENST00000493379 LINC00854A0A1B0GVQ3 168 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 MFSD2BA6NFX1 497 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 SNRPGP15A8MWD9 76 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 CORTO00230 105 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 OVOL1O14753 267 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 GGCTO75223 188 aaKnown RBP5.12□□□□□ -1.59
VPS52-219ENST00000493379 IFNA17P01571 189 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 TRBV12-3P01733 135 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 IGHV3-11P01762 117 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 REG1AP05451 166 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 CLEC3BP05452 202 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 CTSGP08311 255 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 C8orf88P0DMB2 117 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 DEFA4P12838 97 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 SUB1P53999 127 aaKnown RBP eCLIP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms