RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 SMCO3A2RU48 225 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 FAM223BA6NKX1 122 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 SCAF4O95104 1147 aaKnown RBP10.42□□□□□ -0.74
MSH6-208ENST00000493177 IGHV3-48P01763 117 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 IGHV3-23P01764 117 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 RPLP1P05386 114 aaKnown RBP10.42□□□□□ -0.74
MSH6-208ENST00000493177 PSMB8P28062 276 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 C15orf32Q32M92 178 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 ETFRF1Q6IPR1 90 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 FAM223AQ8IWN6 122 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 LILRB2Q8N423 598 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 OR11H4Q8NGC9 324 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 SLC35E1Q96K37 410 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 TNFSF18Q9UNG2 199 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 S4R3C0 116 aa10.42□□□□□ -0.74
MSH6-208ENST00000493177 TRBV9A0A0B4J1U6 114 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 A0A0G2JLM5 398 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 MFSD2BA6NFX1 497 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 PMS2P5A8MQ11 134 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 ADARB2-AS1A8MUL3 147 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 BRI3O95415 125 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 IGHV3-11P01762 117 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 HBG1P69891 147 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 HBG2P69892 147 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 NHLH2Q02577 135 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 CD69Q07108 199 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 BAXQ07812 192 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 SLC38A11Q08AI6 406 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 ARL16Q0P5N6 197 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 MLANAQ16655 118 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 PVRIGQ6DKI7 326 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 ACSM6Q6P461 480 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 SLC16A13Q7RTY0 426 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 HAPLN4Q86UW8 402 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 UBAC2Q8NBM4 344 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 OR1S2Q8NGQ3 325 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 EEF1AKMT3Q96AZ1 226 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 USMG5Q96IX5 58 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 SMIM3Q9BZL3 60 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 MFFQ9GZY8 342 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 HSPB11Q9Y547 144 aa10.41□□□□□ -0.74
MSH6-208ENST00000493177 I3L2K1 104 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 K7EIM0 57 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 S100A11P31949 105 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 GPX4P36969 197 aaPredicted RBP10.4□□□□□ -0.74
MSH6-208ENST00000493177 EIF2B2P49770 351 aaKnown RBP10.4□□□□□ -0.74
MSH6-208ENST00000493177 CLINT1Q14677 625 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 Q56UQ5 140 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 OXLD1Q5BKU9 147 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 TCTEX1D4Q5JR98 221 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 SAMD5Q5TGI4 173 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 ACOT7LQ6ZUV0 252 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 KLHL30-AS1Q8NEE0 82 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 OR5C1Q8NGR4 320 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 VN1R17PQ8TDU5 208 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 SCARB1Q8WTV0 552 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 BSCL2Q96G97 398 aaPredicted RBP10.4□□□□□ -0.74
MSH6-208ENST00000493177 ACY3Q96HD9 319 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 CXorf58Q96LI9 332 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 HYLS1Q96M11 299 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 AQP10Q96PS8 301 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 OR5B12Q96R08 314 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 FNDC4Q9H6D8 234 aaPredicted RBP10.4□□□□□ -0.74
MSH6-208ENST00000493177 C21orf62Q9NYP8 219 aa10.4□□□□□ -0.74
MSH6-208ENST00000493177 CMYA5Q8N3K9 4069 aa10.4□□□□□ -0.75
MSH6-208ENST00000493177 HMSDA8MTL9 139 aa10.39□□□□□ -0.75
MSH6-208ENST00000493177 MFAP4P55083 255 aa10.39□□□□□ -0.75
MSH6-208ENST00000493177 DLK1P80370 383 aa10.39□□□□□ -0.75
MSH6-208ENST00000493177 AKR1C1Q04828 323 aa10.39□□□□□ -0.75
MSH6-208ENST00000493177 KLK9Q2XQG4 91 aa10.39□□□□□ -0.75
MSH6-208ENST00000493177 BEAN1Q3B7T3 259 aa10.39□□□□□ -0.75
MSH6-208ENST00000493177 ZNF491Q8N8L2 437 aa10.39□□□□□ -0.75
MSH6-208ENST00000493177 RNF152Q8N8N0 203 aa10.39□□□□□ -0.75
MSH6-208ENST00000493177 KLK9Q9UKQ9 250 aa10.39□□□□□ -0.75
MSH6-208ENST00000493177 RNF222A6NCQ9 220 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 PRSS46E5RG02 174 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 IGLL1P15814 213 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 RND2P52198 227 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 OR2F1Q13607 317 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 ATP6V1FQ16864 119 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 C8orf86Q6ZUL3 223 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 CACNG8Q8WXS5 425 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 DPF1Q92782 380 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 TMEM147Q9BVK8 224 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 GNB4Q9HAV0 340 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 FBXL17Q9UF56 701 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 MGAM2Q2M2H8 2515 aa10.38□□□□□ -0.75
MSH6-208ENST00000493177 TRBV7-1A0A0A6YYK4 115 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 ANKRD34BA5PLL1 514 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 GNG7O60262 68 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 PRB2P02812 416 aaPredicted RBP10.37□□□□□ -0.75
MSH6-208ENST00000493177 CXCL2P19875 107 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 GPR183P32249 361 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 NPBWR1P48145 328 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
MSH6-208ENST00000493177 KIAA0141Q14154 515 aaPredicted RBP10.37□□□□□ -0.75
MSH6-208ENST00000493177 GAMTQ14353 236 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 CLEC19AQ6UXS0 136 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 ZNF502Q8TBZ5 544 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 NPIPB3Q92617 1050 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms