RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 RNASE11Q8TAA1 199 aaKnown RBP8.54□□□□□ -1.04
LRTM1-202ENST00000493075 RNF2Q99496 336 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 GINS3Q9BRX5 216 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 SCP2D1Q9UJQ7 156 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 TP53TG1Q9Y2A0 90 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 KCNIP3Q9Y2W7 256 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 TMEM56-RWDD3S4R434 201 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 KIR2DL5BA0A0G2JN68 375 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 KIR2DL5BA0A0G2JPC4 375 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 FABP12A6NFH5 140 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 H3BMQ9 156 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 HTR2BP41595 481 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 HOXA1P49639 335 aaPredicted RBP8.54□□□□□ -1.04
LRTM1-202ENST00000493075 APOC4P55056 127 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 ZNF600Q6ZNG1 722 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 Q6ZWC4 215 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 WFDC3Q8IUB2 231 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 KIR2DL5AQ8N109 375 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 OR51S1Q8NGJ8 323 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 KIR2DL5BQ8NHK3 375 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 LHFPL5Q8TAF8 219 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 IL22RA2Q969J5 263 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 GALNT14Q96FL9 552 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 OVOL2Q9BRP0 275 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 C6orf62Q9GZU0 229 aaPredicted RBP8.54□□□□□ -1.04
LRTM1-202ENST00000493075 VSIRQ9H7M9 311 aa8.54□□□□□ -1.04
LRTM1-202ENST00000493075 LCE6AA0A183 80 aa8.53□□□□□ -1.04
LRTM1-202ENST00000493075 CLN5O75503 358 aa8.53□□□□□ -1.04
LRTM1-202ENST00000493075 ODF3L2Q3SX64 289 aa8.53□□□□□ -1.04
LRTM1-202ENST00000493075 OR4X1Q8NH49 305 aa8.53□□□□□ -1.04
LRTM1-202ENST00000493075 GPR146Q96CH1 333 aa8.53□□□□□ -1.04
LRTM1-202ENST00000493075 UBQLN2Q9UHD9 624 aa8.53□□□□□ -1.04
LRTM1-202ENST00000493075 TRAV30A0A087WSZ9 112 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 RPS10-NUDT3A0A1W2PQS6 291 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 SCGB2A1O75556 95 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 OPRK1P41145 380 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 PAFAH1B2P68402 229 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 TMEM187Q14656 261 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 C2orf83Q53S99 150 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 TMEM268Q5VZI3 342 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 STPG3Q8N7X2 389 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 MCFD2Q8NI22 146 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 RNASEH2CQ8TDP1 164 aaKnown RBP8.52□□□□□ -1.05
LRTM1-202ENST00000493075 FNDC4Q9H6D8 234 aaPredicted RBP8.52□□□□□ -1.05
LRTM1-202ENST00000493075 ZFAND3Q9H8U3 227 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 CACNG5Q9UF02 275 aa8.52□□□□□ -1.05
LRTM1-202ENST00000493075 PUS1Q9Y606 427 aaKnown RBP eCLIP8.52□□□□□ -1.05
LRTM1-202ENST00000493075 TRAV2A0A0B4J234 112 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 PIGBOS1A0A0B4J2F0 54 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 A0A1B0GU03 582 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 A0A1W2PS18 150 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 SPRY2O43597 315 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 NPPCP23582 126 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 MLANAQ16655 118 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 NMSQ5H8A3 153 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 TCF24Q7RTU0 167 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 NOXA1Q86UR1 476 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 TMEM230Q96A57 120 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 TMEM231Q9H6L2 316 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 MAP6D1Q9H9H5 199 aa8.51□□□□□ -1.05
LRTM1-202ENST00000493075 HEYLQ9NQ87 328 aaPredicted RBP8.51□□□□□ -1.05
LRTM1-202ENST00000493075 IGHV3-49A0A0A0MS15 119 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 A0A0B4J2A0 478 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 DFFBO76075 338 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 SULT1A3P0DMM9 295 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 SULT1A4P0DMN0 295 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 SLC25A4P12235 298 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 FAUP35544 74 aaKnown RBP8.5□□□□□ -1.05
LRTM1-202ENST00000493075 CCR6P51684 374 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 TNFRSF9Q07011 255 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 LILRB2Q8N423 598 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 DEDD2Q8WXF8 326 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 ST8SIA2Q92186 375 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 RNF183Q96D59 192 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 MCUBQ9NWR8 336 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 MRPL36Q9P0J6 103 aaKnown RBP8.5□□□□□ -1.05
LRTM1-202ENST00000493075 SHPKQ9UHJ6 478 aa8.5□□□□□ -1.05
LRTM1-202ENST00000493075 DYNC2H1Q8NCM8 4307 aaKnown RBP8.49□□□□□ -1.05
LRTM1-202ENST00000493075 IGHV3OR16-13A0A075B7E8 117 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 IGHV3-74A0A0B4J1X5 117 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 CEBPZOSA8MTT3 80 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 IGKV1-17P01599 117 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 APOHP02749 345 aaPredicted RBP8.49□□□□□ -1.05
LRTM1-202ENST00000493075 ANXA3P12429 323 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 CRYBB3P26998 211 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 ATP5IP56385 69 aaPredicted RBP8.49□□□□□ -1.05
LRTM1-202ENST00000493075 AP3S2P59780 193 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 SUPT4H1P63272 117 aaKnown RBP8.49□□□□□ -1.05
LRTM1-202ENST00000493075 SRPXP78539 464 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 KLF9Q13886 244 aaPredicted RBP8.49□□□□□ -1.05
LRTM1-202ENST00000493075 ETFRF1Q6IPR1 90 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 APRG1Q8IVJ8 170 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 LGI3Q8N145 548 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 SLC24A4Q8NFF2 622 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 OR1S2Q8NGQ3 325 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 METTL26Q96S19 204 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 CSTL1Q9H114 145 aa8.49□□□□□ -1.05
LRTM1-202ENST00000493075 MS4A6AQ9H2W1 248 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms