RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ATP5IP56385 69 aaPredicted RBP11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 RAB11AP62491 216 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 CX3CL1P78423 397 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 WT1-ASQ06250 92 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 ICAM4Q14773 271 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 LY6EQ16553 131 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 IL17RELQ6ZVW7 336 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 LURAP1LQ8IV03 231 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 C5orf56Q8N8D9 126 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 OR10P1Q8NGE3 313 aa11.17□□□□□ -0.62
PDZRN3-210ENST00000492909 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 RAB5AP20339 215 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 HNF1AP20823 631 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 SRP14P37108 136 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 IER3P46695 156 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 ARL16Q0P5N6 197 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 HAGHQ16775 308 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 BSXQ3C1V8 233 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 SLC25A24Q6NUK1 477 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 HAPLN4Q86UW8 402 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 LILRB2Q8N423 598 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 OR5R1Q8NH85 324 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 ARPC1AQ92747 370 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 ISOC2Q96AB3 205 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 PINX1Q96BK5 328 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 SRSF8Q9BRL6 282 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 PUS1Q9Y606 427 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 PMS2P5A8MQ11 134 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 TEX22C9J3V5 150 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 M0QZK8 103 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 IGHV4-59P01825 116 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 SLC38A11Q08AI6 406 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 C2orf83Q53S99 150 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 C16orf82Q7Z2V1 217 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 SCGB1C1Q8TD33 95 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 TMEM170AQ8WVE7 144 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 SSMEM1Q8WWF3 244 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 YPEL4Q96NS1 127 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 PSMG3Q9BT73 122 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 PARD6GQ9BYG4 376 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 PRDM13Q9H4Q3 707 aa11.16□□□□□ -0.62
PDZRN3-210ENST00000492909 MXRA5Q9NR99 2828 aa11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 IGHV7-81A0A0B4J1V7 117 aa11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 C5orf52A6NGY3 159 aa11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 APELAP0DMC3 54 aa11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 AREGP15514 252 aa11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 SUB1P53999 127 aaKnown RBP eCLIP11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 SNRPEP62304 92 aaKnown RBP11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 KHDC3LQ587J8 217 aa11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 Q6YL49 198 aa11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 ABHD5Q8WTS1 349 aa11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 ZNF48Q96MX3 618 aaPredicted RBP11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 C12orf57Q99622 126 aa11.15□□□□□ -0.62
PDZRN3-210ENST00000492909 SONP18583 2426 aaKnown RBP11.15□□□□□ -0.63
PDZRN3-210ENST00000492909 LOC102723971A0A1B0GUV8 181 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 INAFM1C9JVW0 142 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 H3BQ15 152 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 OR2C1O95371 312 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 REG1AP05451 166 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 NDPQ00604 133 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 ATP6V1FQ16864 119 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 FAM24BQ8N5W8 94 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 OR10G4Q8NGN3 311 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 HSPB9Q9BQS6 159 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 FAM103A1Q9BTL3 118 aaKnown RBP11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 MTORP42345 2549 aa11.14□□□□□ -0.63
PDZRN3-210ENST00000492909 A0A087WWC5 75 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 UBE2CO00762 179 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 AMY1AP04745 511 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 MEOX2P50222 304 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 ZNF114Q8NC26 417 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 MBD3L1Q8WWY6 194 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 P2RX4Q99571 388 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 TMEM160Q9NX00 188 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 PRSS46E5RG02 174 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 S100A6P06703 90 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 C1QL4Q86Z23 238 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 CYB561D1Q8N8Q1 229 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 RSG1Q9BU20 258 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 RPRMQ9NS64 109 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 VPREB3Q9UKI3 123 aa11.13□□□□□ -0.63
PDZRN3-210ENST00000492909 ANK3Q12955 4377 aaKnown RBP11.12□□□□□ -0.63
PDZRN3-210ENST00000492909 PCP4L1A6NKN8 68 aa11.12□□□□□ -0.63
PDZRN3-210ENST00000492909 EIF3GO75821 320 aaKnown RBP eCLIP11.12□□□□□ -0.63
PDZRN3-210ENST00000492909 SERF2P84101 59 aa11.12□□□□□ -0.63
PDZRN3-210ENST00000492909 OR1P1Q8NH06 330 aa11.12□□□□□ -0.63
PDZRN3-210ENST00000492909 TMEM147Q9BVK8 224 aa11.12□□□□□ -0.63
PDZRN3-210ENST00000492909 GGACTQ9BVM4 153 aa11.12□□□□□ -0.63
PDZRN3-210ENST00000492909 WDR61Q9GZS3 305 aaKnown RBP11.12□□□□□ -0.63
PDZRN3-210ENST00000492909 HIVEP2P31629 2446 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 SH2D7A6NKC9 451 aaPredicted RBP11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 HOXA3O43365 443 aaPredicted RBP11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 TAGLN2P37802 199 aaKnown RBP11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 DLK1P80370 383 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 SLC35E3Q7Z769 313 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 SIGLECL1Q8N7X8 197 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 SGMS2Q8NHU3 365 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 RNASEH2CQ8TDP1 164 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms