RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 CSN3P07498 182 aa10.65□□□□□ -0.7
CCM2-217ENST00000492883 CTSGP08311 255 aa10.65□□□□□ -0.7
CCM2-217ENST00000492883 ATP5IP56385 69 aaPredicted RBP10.65□□□□□ -0.7
CCM2-217ENST00000492883 RAB11AP62491 216 aa10.65□□□□□ -0.7
CCM2-217ENST00000492883 RPP30P78346 268 aaKnown RBP10.65□□□□□ -0.7
CCM2-217ENST00000492883 ID3Q02535 119 aa10.65□□□□□ -0.7
CCM2-217ENST00000492883 RELQ04864 619 aaPredicted RBP10.65□□□□□ -0.7
CCM2-217ENST00000492883 IL34Q6ZMJ4 242 aa10.65□□□□□ -0.7
CCM2-217ENST00000492883 OR10C1Q96KK4 312 aa10.65□□□□□ -0.7
CCM2-217ENST00000492883 FNDC4Q9H6D8 234 aaPredicted RBP10.65□□□□□ -0.7
CCM2-217ENST00000492883 PALMDQ9NP74 551 aa10.65□□□□□ -0.7
CCM2-217ENST00000492883 AURKAIP1Q9NWT8 199 aaPredicted RBP10.65□□□□□ -0.7
CCM2-217ENST00000492883 CCSO14618 274 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 SCGB1D2O95969 90 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 ADMP35318 185 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 POLR2GP62487 172 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCM2-217ENST00000492883 ETFRF1Q6IPR1 90 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 UNQ9165/PRO28630Q6UXU0 137 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 HAPLN4Q86UW8 402 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 OR4D5Q8NGN0 318 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 TMEM170AQ8WVE7 144 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 MARVELD1Q9BSK0 173 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 C20orf24Q9BUV8 137 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 ZNF436Q9C0F3 470 aaPredicted RBP10.64□□□□□ -0.71
CCM2-217ENST00000492883 SIGLEC8Q9NYZ4 499 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
CCM2-217ENST00000492883 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 NDUFA4O00483 81 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 PRAF2O60831 178 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 SCGB2A1O75556 95 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 YIF1AO95070 293 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 LY86O95711 162 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 TMEM50AO95807 157 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 SLC25A4P12235 298 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 FOLR2P14207 255 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 TM4SF20Q53R12 229 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 SPANXN5Q5MJ07 72 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 GSG1LQ6UXU4 331 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 ZBTB8BQ8NAP8 495 aaPredicted RBP10.63□□□□□ -0.71
CCM2-217ENST00000492883 OR4X1Q8NH49 305 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 DYNLRB2Q8TF09 96 aa10.63□□□□□ -0.71
CCM2-217ENST00000492883 ZNF256Q9Y2P7 627 aaPredicted RBP10.63□□□□□ -0.71
CCM2-217ENST00000492883 TRAV30A0A087WSZ9 112 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 SNRPGP15A8MWD9 76 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 SSSCA1O60232 199 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 CLN5O75503 358 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 IGLV1-51P01701 117 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 SPNP16150 400 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 CBLN1P23435 193 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 RND2P52198 227 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 TMEM190Q8WZ59 177 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 C2orf50Q96LR7 162 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 PSENENQ9NZ42 101 aa10.62□□□□□ -0.71
CCM2-217ENST00000492883 MRPL36Q9P0J6 103 aaKnown RBP10.62□□□□□ -0.71
CCM2-217ENST00000492883 STRAPQ9Y3F4 350 aaKnown RBP10.62□□□□□ -0.71
CCM2-217ENST00000492883 IGHV3OR16-8A0A075B7F1 116 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 TMEM213A2RRL7 107 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 C15orf62A8K5M9 175 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 A8MWP6 167 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 EDN2P20800 178 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 GPX4P36969 197 aaPredicted RBP10.61□□□□□ -0.71
CCM2-217ENST00000492883 ELLP55199 621 aaPredicted RBP10.61□□□□□ -0.71
CCM2-217ENST00000492883 CD69Q07108 199 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 DEFB121Q5J5C9 76 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 PRSS54Q6PEW0 395 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 ADAMTSL5Q6ZMM2 481 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 SLC16A13Q7RTY0 426 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 MRAPQ8TCY5 172 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 CACNG8Q8WXS5 425 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 NPIPB3Q92617 1050 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 ACY3Q96HD9 319 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 PRR25Q96S07 402 aa10.61□□□□□ -0.71
CCM2-217ENST00000492883 MGAM2Q2M2H8 2515 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 WI2-2373I1.2A0A1W2PRP0 233 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 H3BP45 60 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 K7EMT4 169 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 ZNF207O43670 478 aaKnown RBP10.6□□□□□ -0.71
CCM2-217ENST00000492883 PTTG1O95997 202 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 MBPP02686 304 aaPredicted RBP10.6□□□□□ -0.71
CCM2-217ENST00000492883 DCTN2Q13561 401 aaKnown RBP10.6□□□□□ -0.71
CCM2-217ENST00000492883 DEFB114Q30KQ6 69 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 ZNF600Q6ZNG1 722 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 TMEM116Q8NCL8 245 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 MARC2Q969Z3 335 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 SLC35E1Q96K37 410 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 SMIM8Q96KF7 97 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 RAB40CQ96S21 281 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 DAZ1Q9NQZ3 744 aaKnown RBP10.6□□□□□ -0.71
CCM2-217ENST00000492883 MRPL27Q9P0M9 148 aaKnown RBP10.6□□□□□ -0.71
CCM2-217ENST00000492883 FBN3Q75N90 2809 aa10.6□□□□□ -0.71
CCM2-217ENST00000492883 VWFP04275 2813 aa10.59□□□□□ -0.71
CCM2-217ENST00000492883 L7N2F9 121 aa10.59□□□□□ -0.71
CCM2-217ENST00000492883 GOSR2O14653 212 aa10.59□□□□□ -0.71
CCM2-217ENST00000492883 GP9P14770 177 aa10.59□□□□□ -0.71
CCM2-217ENST00000492883 OR10J1P30954 320 aa10.59□□□□□ -0.71
CCM2-217ENST00000492883 VAMP2P63027 116 aa10.59□□□□□ -0.71
CCM2-217ENST00000492883 TIGITQ495A1 244 aa10.59□□□□□ -0.71
CCM2-217ENST00000492883 CD300EQ496F6 205 aaPredicted RBP10.59□□□□□ -0.71
CCM2-217ENST00000492883 LCN12Q6JVE5 192 aa10.59□□□□□ -0.71
CCM2-217ENST00000492883 TOMM20LQ6UXN7 152 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms