RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 OR1S2Q8NGQ3 325 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 CEP19Q96LK0 163 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 EBF4Q9BQW3 602 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 RHPN1-AS1Q9BWJ2 59 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 TMEM59Q9BXS4 323 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 DAZ3Q9NR90 486 aaKnown RBP2.19□□□□□ -2.06
UBR4-215ENST00000492606 MRPL22Q9NWU5 206 aaKnown RBP2.19□□□□□ -2.06
UBR4-215ENST00000492606 IKZF2Q9UKS7 526 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 CDH10Q9Y6N8 788 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 MEIKINA0A087WXM9 373 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 DENRO43583 198 aaKnown RBP2.18□□□□□ -2.06
UBR4-215ENST00000492606 ENTPD6O75354 484 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 ZNF688P0C7X2 276 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 CFL1P23528 166 aaKnown RBP2.18□□□□□ -2.06
UBR4-215ENST00000492606 ZBTB25P24278 435 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 KRTAP10-5P60370 271 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 ATP6AP1Q15904 470 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 SDIM1Q6ZPB5 146 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 RBM45Q8IUH3 476 aaKnown RBP2.18□□□□□ -2.06
UBR4-215ENST00000492606 ERI1Q8IV48 349 aaKnown RBP2.18□□□□□ -2.06
UBR4-215ENST00000492606 MICU2Q8IYU8 434 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 UBL4BQ8N7F7 174 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 Q8N976 141 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 ZNF565Q8N9K5 539 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 SH3GL1Q99961 368 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 COPS4Q9BT78 406 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 C20orf24Q9BUV8 137 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 ZNF430Q9H8G1 570 aaPredicted RBP2.18□□□□□ -2.06
UBR4-215ENST00000492606 NEK6Q9HC98 313 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 FGF20Q9NP95 211 aaPredicted RBP2.18□□□□□ -2.06
UBR4-215ENST00000492606 CCL28Q9NRJ3 127 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 RBFOX1Q9NWB1 397 aaKnown RBP2.18□□□□□ -2.06
UBR4-215ENST00000492606 CALML5Q9NZT1 146 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 PSMC3IPQ9P2W1 217 aaPredicted RBP2.18□□□□□ -2.06
UBR4-215ENST00000492606 BTNL2Q9UIR0 455 aa2.18□□□□□ -2.06
UBR4-215ENST00000492606 TRAV27A0A087WT01 109 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 IGHV7-4-1A0A0J9YVY3 117 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 CCDC182A6NF36 153 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 ZNF705GA8MUZ8 300 aaPredicted RBP2.17□□□□□ -2.06
UBR4-215ENST00000492606 DNASE2O00115 360 aaPredicted RBP2.17□□□□□ -2.06
UBR4-215ENST00000492606 SDCBPO00560 298 aaPredicted RBP2.17□□□□□ -2.06
UBR4-215ENST00000492606 XKRYO14609 159 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 AGPAT2O15120 278 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 MRPS12O15235 138 aaKnown RBP2.17□□□□□ -2.06
UBR4-215ENST00000492606 SULT1B1O43704 296 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 CSN2P05814 226 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 RBP1P09455 135 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 AZU1P20160 251 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 CDKN2CP42773 168 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 FGF8P55075 233 aaPredicted RBP2.17□□□□□ -2.06
UBR4-215ENST00000492606 ZNF121P58317 390 aaPredicted RBP2.17□□□□□ -2.06
UBR4-215ENST00000492606 CDC42P60953 191 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 SELENOTP62341 195 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 MYL5Q02045 173 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 REG3AQ06141 175 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 KIAA0087Q14695 138 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 RCN1Q15293 331 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 DHRS4L2Q6PKH6 230 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 PEX26Q7Z412 305 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 PUSL1Q8N0Z8 303 aaKnown RBP2.17□□□□□ -2.06
UBR4-215ENST00000492606 OR4D11Q8NGI4 311 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 OR51L1Q8NGJ5 315 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 OR51A7Q8NH64 312 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 TMEM101Q96IK0 257 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 CCDC42Q96M95 316 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 C1orf50Q9BV19 199 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 GEMIN7Q9H840 131 aaKnown RBP2.17□□□□□ -2.06
UBR4-215ENST00000492606 DNAJC27Q9NZQ0 273 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 CLEC2DQ9UHP7 191 aa2.17□□□□□ -2.06
UBR4-215ENST00000492606 A0A075B6Q4 140 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 IGKV1-27A0A075B6S5 117 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 MUC21A0A0G2JKD1 596 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 H3BMM0 161 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 C15orf65H3BRN8 121 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 K7EMT4 169 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 GOSR2O14653 212 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 ATP8B1O43520 1251 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 ZNF861PO60384 105 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 FADS2O95864 444 aaKnown RBP2.16□□□□□ -2.06
UBR4-215ENST00000492606 NAPSAO96009 420 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 LINC00032P0C843 101 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 ELK1P19419 428 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 CAV2P51636 162 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 TAS2R19P59542 299 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 NUTF2P61970 127 aaKnown RBP2.16□□□□□ -2.06
UBR4-215ENST00000492606 PAFAH1B2P68402 229 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 UNC119Q13432 240 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 KRR1Q13601 381 aaKnown RBP2.16□□□□□ -2.06
UBR4-215ENST00000492606 CASP8Q14790 479 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 TMEM183BQ1AE95 376 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 Q6P435 159 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 Q6ZN92 141 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 UTS2BQ765I0 119 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 DCXRQ7Z4W1 244 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 KRTAP11-1Q8IUC1 163 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 TMEM183AQ8IXX5 376 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 OFCC1Q8IZS5 231 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 FNDC5Q8NAU1 212 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 SUMF2Q8NBJ7 301 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms