RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 BCL2P10415 239 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 FABP2P12104 132 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 RHOBP62745 196 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 ZNF343Q6P1L6 599 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 Q6P435 159 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 UNQ5815/PRO19632Q6UWF5 114 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 ZNF818PQ6ZRF7 136 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM230Q96A57 120 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 ADTRPQ96IZ2 230 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 CITED1Q99966 193 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 PARLQ9H300 379 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 SLC45A2Q9UMX9 530 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 CFAP47Q6ZTR5 3102 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 BAHCC1Q9P281 2608 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 IGHV2-26A0A0B4J1V2 119 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 J3QR06 171 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 MMP23AO75900 390 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 HPRT1P00492 218 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 MPZP25189 248 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 OPRK1P41145 380 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 LGALS7P47929 136 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 RUNX1Q01196 453 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 RELBQ01201 579 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 MST1LQ2TV78 715 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM155Q4W5P6 130 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 ZNF497Q6ZNH5 498 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 NIT1Q86X76 327 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 C11orf53Q8IXP5 236 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM183AQ8IXX5 376 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 MOB3AQ96BX8 217 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 RNF2Q99496 336 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 HSD17B10Q99714 261 aaKnown RBP3.68□□□□□ -1.82
TRA2B-215ENST00000492417 ALKBH7Q9BT30 221 aaPredicted RBP3.68□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM147Q9BVK8 224 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 LOC400499M0QZD8 3231 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 IGKV1D-13A0A0B4J2D9 117 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 CORTO00230 105 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 COX7A2P2O60397 106 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 DEDDO75618 318 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 CA2P00918 260 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 IGKV1-13P0DP09 117 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 SAA4P35542 130 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 GATA4P43694 442 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 RND3P61587 244 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 TFF3Q07654 80 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 MORN2Q502X0 79 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 SLC25A34Q6PIV7 304 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 DTX2Q86UW9 622 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 TEX29Q8N6K0 151 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 C10orf105Q8TEF2 133 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 RAB37Q96AX2 223 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM56Q96MV1 263 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 RSG1Q9BU20 258 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 CACFD1Q9UGQ2 172 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 SAA2-SAA4A0A096LPE2 208 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 CTXND1A0A1B0GTU2 59 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 HELTA6NFD8 242 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 S1PR2O95136 353 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 SAA2P0DJI9 122 aaPredicted RBP3.68□□□□□ -1.82
TRA2B-215ENST00000492417 LOXP28300 417 aaPredicted RBP3.68□□□□□ -1.82
TRA2B-215ENST00000492417 PSMB2P49721 201 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 ZNF430Q9H8G1 570 aaPredicted RBP3.68□□□□□ -1.82
TRA2B-215ENST00000492417 HES4Q9HCC6 221 aa3.68□□□□□ -1.82
TRA2B-215ENST00000492417 CHD3Q12873 2000 aaKnown RBP3.67□□□□□ -1.82
TRA2B-215ENST00000492417 C17orf98A8MV24 154 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 PGLYRP1O75594 196 aaPredicted RBP3.67□□□□□ -1.82
TRA2B-215ENST00000492417 MELTFP08582 738 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 MC5RP33032 325 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 GPX4P36969 197 aaPredicted RBP3.67□□□□□ -1.82
TRA2B-215ENST00000492417 RPL27AP46776 148 aaKnown RBP3.67□□□□□ -1.82
TRA2B-215ENST00000492417 MFAP2P55001 183 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 TNFRSF9Q07011 255 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 HEPN1Q6WQI6 88 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 ZNF295-AS1Q8N0V1 137 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM252Q8N6L7 170 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 ZNF645Q8N7E2 425 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 OR1L4Q8NGR5 311 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 VSTM2AQ8TAG5 236 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 AQP10Q96PS8 301 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 SMR3AQ99954 134 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 NDFIP1Q9BT67 221 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 CRYM-AS1A6NIL9 109 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 H3BVH4 76 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 NPFFO15130 113 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 PDE6DO43924 150 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 IGHV3-11P01762 117 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 IGHV2-5P01817 119 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 APCSP02743 223 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 MT-ND6P03923 174 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 CD74P04233 296 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 SLC25A5P05141 298 aaKnown RBP3.67□□□□□ -1.82
TRA2B-215ENST00000492417 CD55P08174 381 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 SLC35B1P78383 322 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 SERF2P84101 59 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 MEF2BQ02080 365 aaPredicted RBP3.67□□□□□ -1.82
TRA2B-215ENST00000492417 SRSF9Q13242 221 aaKnown RBP eCLIP3.67□□□□□ -1.82
TRA2B-215ENST00000492417 FXYD3Q14802 87 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 SCGB1D4Q6XE38 83 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 OR2T6Q8NHC8 308 aa3.67□□□□□ -1.82
TRA2B-215ENST00000492417 RARRES2Q99969 163 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms