RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 GPR132Q9UNW8 380 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 PUS1Q9Y606 427 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 TMEM56-RWDD3S4R434 201 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 IGHV3-49A0A0A0MS15 119 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 TEX13DA0A0J9YY54 714 aaPredicted RBP6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 MPTX1A8MV57 137 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 CTDSP2O14595 271 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 YIF1AO95070 293 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 RAB3DO95716 219 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 IFNA17P01571 189 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 GIG44P09565 113 aaPredicted RBP6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 RPL35AP18077 110 aaKnown RBP6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 SUB1P53999 127 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 SPCS3P61009 180 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 MEF2DQ14814 521 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 MLANAQ16655 118 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 SPINK9Q5DT21 86 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 TCF24Q7RTU0 167 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 GPR141Q7Z602 305 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 TMEM217Q8N7C4 229 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 SLC35G3Q8N808 338 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 MARCH1Q8TCQ1 289 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 TMEM170AQ8WVE7 144 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 SMIM4Q8WVI0 70 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 PINX1Q96BK5 328 aaKnown RBP6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 GRAMD2BQ96HH9 432 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 SOSTQ9BQB4 213 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 C6orf62Q9GZU0 229 aaPredicted RBP6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 MS4A6AQ9H2W1 248 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 C11orf68Q9H3H3 251 aaKnown RBP6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 COPZ2Q9P299 210 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 RABL2AQ9UBK7 228 aaPredicted RBP6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 RABL2BQ9UNT1 228 aa6.13□□□□□ -1.43
SMARCB1-207ENST00000491967 IGHV3OR16-13A0A075B7E8 117 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 TRAV30A0A087WSZ9 112 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 IGHV3-74A0A0B4J1X5 117 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 K7EQG2 157 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 GSTZ1O43708 216 aaPredicted RBP6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 OR5AC1P0C628 307 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 NPPCP23582 126 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 AKR1C2P52895 323 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 YPEL3P61236 119 aaPredicted RBP6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 PAFAH1B2P68402 229 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 DHODHQ02127 395 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 SPCS2Q15005 226 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 C2orf83Q53S99 150 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 NMSQ5H8A3 153 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 SELENOHQ8IZQ5 122 aaKnown RBP6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 DYNC2LI1Q8TCX1 351 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 RNASEH2CQ8TDP1 164 aaKnown RBP6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 DCANP1Q8TF63 244 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 RBPMSQ93062 196 aaKnown RBP6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 GPR146Q96CH1 333 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 BCL7BQ9BQE9 202 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 NAA60Q9H7X0 242 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 CACFD1Q9UGQ2 172 aa6.12□□□□□ -1.43
SMARCB1-207ENST00000491967 A0A1W2PS18 150 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 CXorf65A6NEN9 183 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 CRYM-AS1A6NIL9 109 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 IGLC1P0CG04 106 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 SLC25A4P12235 298 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 HTR2BP41595 481 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 PPP5CP53041 499 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 TRIM16LQ309B1 348 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 RNASE12Q5GAN4 147 aaKnown RBP6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 PRSS54Q6PEW0 395 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 TRPT1Q86TN4 253 aaKnown RBP6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 GBGT1Q8N5D6 347 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 FAM24BQ8N5W8 94 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 OR4C16Q8NGL9 310 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 IL22RA2Q969J5 263 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 TMEM230Q96A57 120 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 RRNAD1Q96FB5 475 aaKnown RBP6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 RARRES2Q99969 163 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 PDCD10Q9BUL8 212 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 TMEM231Q9H6L2 316 aa6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 SEPSECSQ9HD40 501 aaKnown RBP6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 CCDC59Q9P031 241 aaKnown RBP6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 KLK5Q9Y337 293 aaPredicted RBP6.11□□□□□ -1.43
SMARCB1-207ENST00000491967 KMT2AQ03164 3969 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 ANKRD20A5PA0PJZ0 165 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 NXPH3O95157 252 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 AKAIN1P0CW23 69 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 OPRK1P41145 380 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 P2RY1P47900 373 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 TFPI2P48307 235 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 HOXA1P49639 335 aaPredicted RBP6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 TMBIM6P55061 237 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 DEFB131AP59861 70 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 TMEM187Q14656 261 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 TIGITQ495A1 244 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 SCGB2B2Q4G0G5 96 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 TMEM41BQ5BJD5 291 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 LGALS9CQ6DKI2 356 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 FAAP20Q6NZ36 180 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 CLVS1Q8IUQ0 354 aaPredicted RBP6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 CSNK1G2-AS1Q8NCQ2 148 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 OR11H2Q8NH07 326 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 RAB2BQ8WUD1 216 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms