RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 LINC00476Q8WZB0 136 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 SCGB3A2Q96PL1 93 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 METTL26Q96S19 204 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 TP53RKQ96S44 253 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 C11orf68Q9H3H3 251 aaKnown RBP6.47□□□□□ -1.37
NUP50-217ENST00000491860 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.47□□□□□ -1.37
NUP50-217ENST00000491860 IGHV3OR16-8A0A075B7F1 116 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 A0A0B4J293 547 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 CLN5O75503 358 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 CDS2O95674 445 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 TMEM50AO95807 157 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 IGKV1-5P01602 117 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 P0C879 139 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 RNASE2P10153 161 aaKnown RBP6.46□□□□□ -1.38
NUP50-217ENST00000491860 SLC25A4P12235 298 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 RPL35AP18077 110 aaKnown RBP6.46□□□□□ -1.38
NUP50-217ENST00000491860 OPRK1P41145 380 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 PPP5CP53041 499 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 AP2S1P53680 142 aaPredicted RBP6.46□□□□□ -1.38
NUP50-217ENST00000491860 TCTAP57738 103 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.38
NUP50-217ENST00000491860 PMS2P11Q13670 270 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 SCGB2B2Q4G0G5 96 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 AARDQ4LEZ3 155 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 ETFRF1Q6IPR1 90 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 MORN3Q6PF18 240 aaPredicted RBP6.46□□□□□ -1.38
NUP50-217ENST00000491860 GPR141Q7Z602 305 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 OR1S2Q8NGQ3 325 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 RBPMSQ93062 196 aaKnown RBP6.46□□□□□ -1.38
NUP50-217ENST00000491860 TMEM230Q96A57 120 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 PRRT1Q99946 306 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 RARRES2Q99969 163 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 BCL7BQ9BQE9 202 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 MRPS26Q9BYN8 205 aaKnown RBP6.46□□□□□ -1.38
NUP50-217ENST00000491860 TMEM222Q9H0R3 208 aa6.46□□□□□ -1.38
NUP50-217ENST00000491860 PUS1Q9Y606 427 aaKnown RBP eCLIP6.46□□□□□ -1.38
NUP50-217ENST00000491860 TEX13DA0A0J9YY54 714 aaPredicted RBP6.45□□□□□ -1.38
NUP50-217ENST00000491860 HELTA6NFD8 242 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 CTDSPLO15194 276 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 RGS5O15539 181 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 GSTZ1O43708 216 aaPredicted RBP6.45□□□□□ -1.38
NUP50-217ENST00000491860 LY6G6CO95867 125 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 IFNA4P05014 189 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 SPP1P10451 314 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 PI3P19957 117 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 NUP62P37198 522 aaPredicted RBP6.45□□□□□ -1.38
NUP50-217ENST00000491860 TFPI2P48307 235 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 TMEM187Q14656 261 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 BSXQ3C1V8 233 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 APRG1Q8IVJ8 170 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 STHQ8IWL8 128 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 OR13C8Q8NGS7 320 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 MARCH1Q8TCQ1 289 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 RNASEH2CQ8TDP1 164 aaKnown RBP6.45□□□□□ -1.38
NUP50-217ENST00000491860 SMIM4Q8WVI0 70 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 ST8SIA2Q92186 375 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 IL22RA2Q969J5 263 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 MS4A6AQ9H2W1 248 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 ZFAND3Q9H8U3 227 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 HEYLQ9NQ87 328 aaPredicted RBP6.45□□□□□ -1.38
NUP50-217ENST00000491860 PFDN2Q9UHV9 154 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 KCNIP3Q9Y2W7 256 aa6.45□□□□□ -1.38
NUP50-217ENST00000491860 IGKV3-7A0A075B6H7 116 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 CA1P00915 261 aaPredicted RBP6.44□□□□□ -1.38
NUP50-217ENST00000491860 AKAIN1P0CW23 69 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 ANXA3P12429 323 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 CRYBB3P26998 211 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 ETV6P41212 452 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 ATP5IP56385 69 aaPredicted RBP6.44□□□□□ -1.38
NUP50-217ENST00000491860 C2orf83Q53S99 150 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 SPINK9Q5DT21 86 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 RNASE12Q5GAN4 147 aaKnown RBP6.44□□□□□ -1.38
NUP50-217ENST00000491860 CENPSQ8N2Z9 138 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 GBGT1Q8N5D6 347 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 OR11H2Q8NH07 326 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 C11orf45Q8TAV5 145 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 Q8WTZ3 238 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 RAB2BQ8WUD1 216 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 ZNF414Q96IQ9 312 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 NAA60Q9H7X0 242 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 SEPSECSQ9HD40 501 aaKnown RBP6.44□□□□□ -1.38
NUP50-217ENST00000491860 RSL24D1Q9UHA3 163 aaKnown RBP6.44□□□□□ -1.38
NUP50-217ENST00000491860 RABAC1Q9UI14 185 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 SCP2D1Q9UJQ7 156 aa6.44□□□□□ -1.38
NUP50-217ENST00000491860 IGHV3-49A0A0A0MS15 119 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 CRYM-AS1A6NIL9 109 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 CEBPZOSA8MTT3 80 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 C11orf94C9JXX5 98 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 NOL3O60936 208 aaKnown RBP6.43□□□□□ -1.38
NUP50-217ENST00000491860 IGHV3-48P01763 117 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 OR5AC1P0C628 307 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 DEFB131AP59861 70 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 YPEL3P61236 119 aaPredicted RBP6.43□□□□□ -1.38
NUP50-217ENST00000491860 NUTF2P61970 127 aaKnown RBP6.43□□□□□ -1.38
NUP50-217ENST00000491860 SRPXP78539 464 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 IL18Q14116 193 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 RBMS2Q15434 407 aaKnown RBP6.43□□□□□ -1.38
NUP50-217ENST00000491860 IZUMO4Q1ZYL8 232 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 SP6Q3SY56 376 aa6.43□□□□□ -1.38
NUP50-217ENST00000491860 LGALS9CQ6DKI2 356 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms