RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 ST6GALNAC6Q969X2 333 aa10.93□□□□□ -0.66
COL6A3-212ENST00000491769 IGHV2-26A0A0B4J1V2 119 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 E9PQ18 207 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 SLC25A16P16260 332 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 ATP5G3P48201 142 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 EIF4EBP2Q13542 120 aaPredicted RBP10.92□□□□□ -0.66
COL6A3-212ENST00000491769 C15orf32Q32M92 178 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 LINC01590Q5TEZ4 76 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 MLNRO43193 412 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 MORN2Q502X0 79 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 TEX38Q6PEX7 206 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 ARAP2Q8WZ64 1704 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 SFTA2Q6UW10 78 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 YPEL1O60688 119 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 LHBP01229 141 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 GATD1Q8NB37 220 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 YPEL2Q96QA6 119 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 Q6AWC8 147 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 PSMG3Q9BT73 122 aaPredicted RBP10.92□□□□□ -0.66
COL6A3-212ENST00000491769 CYSLTR1Q9Y271 337 aa10.92□□□□□ -0.66
COL6A3-212ENST00000491769 RPL15P61313 204 aaKnown RBP10.91□□□□□ -0.66
COL6A3-212ENST00000491769 NDPQ00604 133 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 ST6GALNAC3Q8NDV1 305 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 OR2K2Q8NGT1 345 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 IL36BQ9NZH7 164 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 ARID1AO14497 2285 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 NAT1P18440 290 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 IMMP2LQ96T52 175 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 PQLC2LA1A4F0 135 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 A0A0G2JNJ9 132 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 TMEM8BA6NDV4 472 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 TGFBR3LH3BV60 316 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 IGLV3-19P01714 112 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 RPL36AP83881 106 aaKnown RBP10.91□□□□□ -0.66
COL6A3-212ENST00000491769 SRSF1Q07955 248 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL6A3-212ENST00000491769 RPL36ALQ969Q0 106 aaKnown RBP10.91□□□□□ -0.66
COL6A3-212ENST00000491769 Q9UFV3 132 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 RP1P56715 2156 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 A0A1B0GWB2 263 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 LINC00614P0C842 121 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 DANCRP0C864 163 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 TIMP3P35625 211 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 Q0VFX4 171 aa10.91□□□□□ -0.66
COL6A3-212ENST00000491769 SCN4AP35499 1836 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 A0A1B0GW15 77 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 RPL32P62910 135 aaKnown RBP10.9□□□□□ -0.66
COL6A3-212ENST00000491769 ZNF525Q8N782 197 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 RCC1LQ96I51 464 aaKnown RBP10.9□□□□□ -0.66
COL6A3-212ENST00000491769 CXorf65A6NEN9 183 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 C15orf61A6NNL5 157 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 WISP3O95389 354 aaPredicted RBP10.9□□□□□ -0.66
COL6A3-212ENST00000491769 ZFP36L1Q07352 338 aaKnown RBP10.9□□□□□ -0.66
COL6A3-212ENST00000491769 C1QTNF4Q9BXJ3 329 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 FOCADQ5VW36 1801 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 GGTLC3B5MD39 225 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 PAX4O43316 350 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 HIGD1CA8MV81 97 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 FCN3O75636 299 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 PYYP10082 97 aa10.9□□□□□ -0.66
COL6A3-212ENST00000491769 PRCDQ00LT1 54 aa10.9□□□□□ -0.67
COL6A3-212ENST00000491769 FAM169BQ8N8A8 192 aa10.9□□□□□ -0.67
COL6A3-212ENST00000491769 MRAPQ8TCY5 172 aa10.9□□□□□ -0.67
COL6A3-212ENST00000491769 DPRXA6NFQ7 191 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 VWCEQ96DN2 955 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 WBP1Q96G27 269 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 TM2D1Q9BX74 207 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 NAPSAO96009 420 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 PPP1R3EQ9H7J1 279 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 PSG8Q9UQ74 426 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 TPTE2P1Q5T6R2 138 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 ZNF660Q6AZW8 331 aaPredicted RBP10.89□□□□□ -0.67
COL6A3-212ENST00000491769 TNS1Q9HBL0 1735 aaKnown RBP10.89□□□□□ -0.67
COL6A3-212ENST00000491769 IGKV2-40A0A087WW87 121 aaPredicted RBP10.89□□□□□ -0.67
COL6A3-212ENST00000491769 IL18BPO95998 194 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 IGKV2D-40P01614 121 aaPredicted RBP10.89□□□□□ -0.67
COL6A3-212ENST00000491769 CHTOPQ9Y3Y2 248 aaKnown RBP10.89□□□□□ -0.67
COL6A3-212ENST00000491769 ANKRD31Q8N7Z5 1873 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 F5H768 121 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 BPESC1Q9GZL8 116 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 SCN2AQ99250 2005 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 COL18A1P39060 1754 aa10.89□□□□□ -0.67
COL6A3-212ENST00000491769 SRSF6Q13247 344 aaKnown RBP10.88□□□□□ -0.67
COL6A3-212ENST00000491769 LAMTOR3Q9UHA4 124 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 PSPNO60542 156 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 SLC25A2Q9BXI2 301 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 TMEM200BQ69YZ2 307 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 RAMP3O60896 148 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 COQ2Q96H96 371 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 C14orf144Q96I85 54 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 TOMM40O96008 361 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 ZNF876PQ49A33 203 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 TMEM144Q7Z5S9 345 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 OR10W1Q8NGF6 305 aa10.88□□□□□ -0.67
COL6A3-212ENST00000491769 NPDC1Q9NQX5 325 aaPredicted RBP10.88□□□□□ -0.67
COL6A3-212ENST00000491769 ZNF646O15015 1829 aaPredicted RBP10.88□□□□□ -0.67
COL6A3-212ENST00000491769 IZUMO1RA6ND01 250 aa10.87□□□□□ -0.67
COL6A3-212ENST00000491769 LY6HO94772 140 aa10.87□□□□□ -0.67
COL6A3-212ENST00000491769 MBNL3Q9NUK0 354 aaKnown RBP10.87□□□□□ -0.67
COL6A3-212ENST00000491769 MORN3Q6PF18 240 aaPredicted RBP10.87□□□□□ -0.67
COL6A3-212ENST00000491769 SSBP4Q9BWG4 385 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms