RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TRAV39A0A0B4J263 110 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 hADV38S2A0JD32 116 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 C17orf112F2Z3M2 114 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 IGHV1-8P0DP01 117 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 COX7A1P24310 79 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 HNF4GQ14541 408 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 UTF1Q5T230 341 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 PPP1R35Q8TAP8 253 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 FAM216AQ8WUB2 273 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 CORO2AQ92828 525 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 ZDHHC16Q969W1 377 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 JMJD8Q96S16 334 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-219ENST00000491747 DNHD1Q96M86 4753 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 ODAMA1E959 279 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 CNN1P51911 297 aaKnown RBP7.56□□□□□ -1.2
BRCA1-219ENST00000491747 CATR1Q13166 79 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 ZNF124Q15973 351 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 LDLRAD2Q5SZI1 272 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 ZNF645Q8N7E2 425 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 NPCDR1Q9BY65 106 aa7.56□□□□□ -1.2
BRCA1-219ENST00000491747 C11orf94C9JXX5 98 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 PDE6DO43924 150 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 PAGE4O60829 102 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 KRASP01116 189 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 CGB3P0DN86 165 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 CGB7P0DN87 165 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 PAX5Q02548 391 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 C17orf58Q2M2W7 97 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 LHFPL4Q7Z7J7 247 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 OR13A1Q8NGR1 328 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 KCNIP1Q9NZI2 227 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 IGHV4-59P01825 116 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 RBP4P02753 201 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 RNASE1P07998 156 aaKnown RBP7.55□□□□□ -1.2
BRCA1-219ENST00000491747 G6PCP35575 357 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 IER3P46695 156 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 CDC34P49427 236 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-219ENST00000491747 PRAMEF5Q5TYX0 476 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 TGIF2LXQ8IUE1 241 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 DYNAPQ8N1N2 210 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 UBALD1Q8TB05 177 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 DTD1Q8TEA8 209 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 GALMQ96C23 342 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 IMMP2LQ96T52 175 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 ZNRD1Q9P1U0 126 aa7.55□□□□□ -1.2
BRCA1-219ENST00000491747 TRGV10A0A0A0MS01 117 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 PMS2P5A8MQ11 134 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 ODF3BA8MYP8 253 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 TCAPO15273 167 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 SOX15O60248 233 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 RAMP3O60896 148 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 SNRPCP09234 159 aaKnown RBP7.54□□□□□ -1.2
BRCA1-219ENST00000491747 NUTF2P61970 127 aaKnown RBP7.54□□□□□ -1.2
BRCA1-219ENST00000491747 VWC2Q2TAL6 325 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 GBGT1Q8N5D6 347 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 SPATA3Q8NHX4 192 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 GATAD1Q8WUU5 269 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 OR2D2Q9H210 308 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 RBMXL2O75526 392 aaKnown RBP7.54□□□□□ -1.2
BRCA1-219ENST00000491747 P0C879 139 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 IL3RAP26951 378 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 FAM78BQ5VT40 261 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 LINC01551Q86U37 167 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 TCTEX1D1Q8N7M0 179 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 OR11H6Q8NGC7 330 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 TMEM133Q9H2Q1 129 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 TRAPPC1Q9Y5R8 145 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 TENM1Q9UKZ4 2725 aa7.54□□□□□ -1.2
BRCA1-219ENST00000491747 IGHV2-26A0A0B4J1V2 119 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 ZNF320A2RRD8 509 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 TMEM89A2RUT3 159 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 CHRNA7P36544 502 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 ZNF816Q0VGE8 651 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-219ENST00000491747 FOXL1Q12952 345 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 SLC35E4Q6ICL7 350 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 H2BFWTQ7Z2G1 175 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 OR5T1Q8NG75 326 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 MRGPRDQ8TDS7 321 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 NEU1Q99519 415 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 NCOR1P1Q9H4R4 102 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 FKBP11Q9NYL4 201 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 TMEM30CPA0ZSE6 113 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 F6UZH7 168 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 RAB29O14966 203 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 S1PR2O95136 353 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 SCGB1D1O95968 90 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 ERVFC1-1P60608 527 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 OR1L1Q8NH94 360 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 SSMEM1Q8WWF3 244 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 TXNDC17Q9BRA2 123 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 MEGF9Q9H1U4 602 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 GAL3ST2Q9H3Q3 398 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 KCNIP2Q9NS61 270 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 CALYQ9NYX4 217 aa7.53□□□□□ -1.2
BRCA1-219ENST00000491747 KBTBD11-OT1A0A1B0GTJ5 212 aa7.52□□□□□ -1.21
BRCA1-219ENST00000491747 A0A1W2PPV4 95 aa7.52□□□□□ -1.21
BRCA1-219ENST00000491747 FAM181BA6NEQ2 426 aa7.52□□□□□ -1.21
BRCA1-219ENST00000491747 SSTR5P35346 364 aa7.52□□□□□ -1.21
BRCA1-219ENST00000491747 RPL30P62888 115 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms