RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 PSG11Q9UQ72 335 aa3.53□□□□□ -1.85
CLIP4-211ENST00000491701 TSSC4Q9Y5U2 329 aaPredicted RBP3.53□□□□□ -1.85
CLIP4-211ENST00000491701 TMEM56-RWDD3S4R434 201 aa3.53□□□□□ -1.85
CLIP4-211ENST00000491701 SONP18583 2426 aaKnown RBP3.52□□□□□ -1.85
CLIP4-211ENST00000491701 TRAV3A0A0B4J244 114 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 TRBV7-9A0A0J9YWB2 115 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 A0A1B0GW64 132 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 TMEM213A2RRL7 107 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 FCN1O00602 326 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 BET1O15155 118 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 NDUFA2O43678 99 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 DUS4LO95620 317 aaKnown RBP3.52□□□□□ -1.85
CLIP4-211ENST00000491701 CTXN2P0C2S0 81 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 CTRB1P17538 263 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 PAX6P26367 422 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 GPR183P32249 361 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 KIR2DS4P43632 304 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 ZNF137PP52743 207 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 PIGPP57054 158 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 B2MP61769 119 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 SSBP2P81877 361 aaPredicted RBP3.52□□□□□ -1.85
CLIP4-211ENST00000491701 ARL16Q0P5N6 197 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 KIR2DS1Q14954 304 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 SLC9A3R2Q15599 337 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 MSMO1Q15800 293 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 RPEL1Q2QD12 228 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 LGALSLQ3ZCW2 172 aaPredicted RBP3.52□□□□□ -1.85
CLIP4-211ENST00000491701 SCGB2B2Q4G0G5 96 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 RPL39P5Q59GN2 51 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 TMEM128Q5BJH2 165 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 NMSQ5H8A3 153 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 KLF17Q5JT82 389 aaPredicted RBP3.52□□□□□ -1.85
CLIP4-211ENST00000491701 CTRB2Q6GPI1 263 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 ZNF833PQ6ZTB9 187 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 C9orf139Q6ZV77 190 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 MOB1BQ7L9L4 216 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 TCTE3Q8IZS6 198 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 CIARTQ8N365 385 aaPredicted RBP3.52□□□□□ -1.85
CLIP4-211ENST00000491701 PNKDQ8N490 385 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 C12orf45Q8N5I9 185 aaPredicted RBP3.52□□□□□ -1.85
CLIP4-211ENST00000491701 NECAP1Q8NC96 275 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 PIFOQ8TCI5 191 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 RCHY1Q96PM5 261 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 BPESC1Q9GZL8 116 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 NAA60Q9H7X0 242 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 SLC2A9Q9NRM0 540 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 SCP2D1Q9UJQ7 156 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 TRAPPC2LQ9UL33 140 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 KCNIP3Q9Y2W7 256 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 LINC00312Q9Y6C7 94 aa3.52□□□□□ -1.85
CLIP4-211ENST00000491701 STAB1Q9NY15 2570 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 FAM172BPA6NC97 362 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 DNAJC9-AS1A6NH13 148 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 ODF3BA8MYP8 253 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 GPR31O00270 319 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 NDUFB3O43676 98 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 DHFRP00374 187 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 IGLV2-23P01705 113 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 IGHV4-59P01825 116 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 OR5AC1P0C628 307 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 RD3LP0DJH9 198 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 IGHV1-8P0DP01 117 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 IGHV4-38-2P0DP08 117 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 AKR1C4P17516 323 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 CXCL2P19875 107 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 F2RP25116 425 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 NKX2-5P52952 324 aaPredicted RBP3.51□□□□□ -1.85
CLIP4-211ENST00000491701 FXYD4P59646 89 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 RPL31P62899 125 aaKnown RBP3.51□□□□□ -1.85
CLIP4-211ENST00000491701 LTC4SQ16873 150 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 FAM120AOSQ5T036 256 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 LINC00336Q6ZUF6 198 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 TMED4Q7Z7H5 227 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 SPAG16Q8N0X2 631 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 MTURNQ8N3F0 131 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 OR5T1Q8NG75 326 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 OR4P4Q8NGL7 312 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 OR1S2Q8NGQ3 325 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 NEK7Q8TDX7 302 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 SECTM1Q8WVN6 248 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 RTN4IP1Q8WWV3 396 aaPredicted RBP3.51□□□□□ -1.85
CLIP4-211ENST00000491701 ZNF414Q96IQ9 312 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 SEC22AQ96IW7 307 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 FAM218AQ96MZ4 157 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 NABP2Q9BQ15 211 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 SUCNR1Q9BXA5 334 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 PARD6GQ9BYG4 376 aaPredicted RBP3.51□□□□□ -1.85
CLIP4-211ENST00000491701 ZNF436Q9C0F3 470 aaPredicted RBP3.51□□□□□ -1.85
CLIP4-211ENST00000491701 PRSS22Q9GZN4 317 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 TMEM222Q9H0R3 208 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 RETNQ9HD89 108 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 PLSCR3Q9NRY6 295 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 GLS2Q9UI32 602 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 JPT1Q9UK76 154 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 V9GYY9 64 aa3.51□□□□□ -1.85
CLIP4-211ENST00000491701 FN1P02751 2386 aaKnown RBP3.51□□□□□ -1.85
CLIP4-211ENST00000491701 C3orf85A0A1B0GTC6 90 aa3.5□□□□□ -1.85
CLIP4-211ENST00000491701 MSGN1A6NI15 193 aa3.5□□□□□ -1.85
CLIP4-211ENST00000491701 PMS2P5A8MQ11 134 aa3.5□□□□□ -1.85
CLIP4-211ENST00000491701 E7EUB6 86 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms