RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 CFHR3Q02985 330 aa10.57□□□□□ -0.72
CDK9-204ENST00000491521 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
CDK9-204ENST00000491521 TMEM252Q8N6L7 170 aa10.57□□□□□ -0.72
CDK9-204ENST00000491521 ZNF114Q8NC26 417 aa10.57□□□□□ -0.72
CDK9-204ENST00000491521 OR11H4Q8NGC9 324 aa10.57□□□□□ -0.72
CDK9-204ENST00000491521 OR10P1Q8NGE3 313 aa10.57□□□□□ -0.72
CDK9-204ENST00000491521 MCRIP2Q9BUT9 160 aaKnown RBP10.57□□□□□ -0.72
CDK9-204ENST00000491521 THYN1Q9P016 225 aa10.57□□□□□ -0.72
CDK9-204ENST00000491521 ZNF580Q9UK33 172 aa10.57□□□□□ -0.72
CDK9-204ENST00000491521 DNAH9Q9NYC9 4486 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 SOX15O60248 233 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 OR2J3O76001 311 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 IGHG4P01861 327 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 TRGV3P03979 118 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 PPIFP30405 207 aaKnown RBP10.56□□□□□ -0.72
CDK9-204ENST00000491521 MFAP2P55001 183 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 EWSR1Q01844 656 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDK9-204ENST00000491521 NHLH2Q02577 135 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 BSXQ3C1V8 233 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 TMEM14EPQ6UXP3 125 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 TMEM217Q8N7C4 229 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 TMEM170AQ8WVE7 144 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 HYLS1Q96M11 299 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 MFFQ9GZY8 342 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 KLK15Q9H2R5 256 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 FBXL7Q9UJT9 491 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 TNFSF18Q9UNG2 199 aa10.56□□□□□ -0.72
CDK9-204ENST00000491521 IGHV3-21A0A0B4J1V1 117 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 HMSDA8MTL9 139 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 CORTO00230 105 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 NDUFB8O95169 186 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 OPRK1P41145 380 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 CDX1P47902 265 aaPredicted RBP10.55□□□□□ -0.72
CDK9-204ENST00000491521 EIF2B2P49770 351 aaKnown RBP10.55□□□□□ -0.72
CDK9-204ENST00000491521 SULT1A1P50225 295 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 TPPP2P59282 170 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 RHOGP84095 191 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 EGFEM1PQ0D2K5 195 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 ACOT7LQ6ZUV0 252 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 RNASEH2CQ8TDP1 164 aaKnown RBP10.55□□□□□ -0.72
CDK9-204ENST00000491521 C4orf3Q8WVX3 66 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 FANCD2OSQ96PS1 177 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 GNB4Q9HAV0 340 aa10.55□□□□□ -0.72
CDK9-204ENST00000491521 IGLV11-55A0A075B6I3 123 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 RPS10-NUDT3A0A1W2PQS6 291 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 H3BUA1 57 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 SCAF4O95104 1147 aaKnown RBP10.54□□□□□ -0.72
CDK9-204ENST00000491521 MT-CO2P00403 227 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 IGLV1-40P01703 118 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 HNRNPCP07910 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDK9-204ENST00000491521 PSMB8P28062 276 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 HBG1P69891 147 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 HBG2P69892 147 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 DEFA5Q01523 94 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 ATP5G2Q06055 141 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 EXOSC2Q13868 293 aaKnown RBP10.54□□□□□ -0.72
CDK9-204ENST00000491521 MLANAQ16655 118 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 LILRB2Q8N423 598 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 RNF152Q8N8N0 203 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 NECAP1Q8NC96 275 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 OR11H1Q8NG94 326 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 OR1S2Q8NGQ3 325 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 AQP10Q96PS8 301 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 SMIM3Q9BZL3 60 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 SLA2Q9H6Q3 261 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 HSPB11Q9Y547 144 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 DMRT1Q9Y5R6 373 aa10.54□□□□□ -0.72
CDK9-204ENST00000491521 SMCO3A2RU48 225 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 SEC14L6B5MCN3 397 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 IGHV3-48P01763 117 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 S100A11P31949 105 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 GPX4P36969 197 aaPredicted RBP10.53□□□□□ -0.72
CDK9-204ENST00000491521 RAB9AP51151 201 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 NKX2-5P52952 324 aaPredicted RBP10.53□□□□□ -0.72
CDK9-204ENST00000491521 BAXQ07812 192 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 SLC38A11Q08AI6 406 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 ARL16Q0P5N6 197 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 ETFRF1Q6IPR1 90 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 ACSM6Q6P461 480 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 BSCL2Q96G97 398 aaPredicted RBP10.53□□□□□ -0.72
CDK9-204ENST00000491521 S4R3C0 116 aa10.53□□□□□ -0.72
CDK9-204ENST00000491521 TRBV9A0A0B4J1U6 114 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 A0A0D9SG52 128 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 RNF222A6NCQ9 220 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 FAM223BA6NKX1 122 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 PMS2P5A8MQ11 134 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 BOLA2-SMG1P6H3BVE0 249 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 CD69Q07108 199 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 OR2F1Q13607 317 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 CLINT1Q14677 625 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 ATP6V1FQ16864 119 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 C15orf32Q32M92 178 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 PVRIGQ6DKI7 326 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 HAPLN4Q86UW8 402 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 FAM223AQ8IWN6 122 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 ZNF491Q8N8L2 437 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 OR5C1Q8NGR4 320 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 OR1N2Q8NGR9 330 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 ACY3Q96HD9 319 aa10.52□□□□□ -0.73
CDK9-204ENST00000491521 SLC35E1Q96K37 410 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms