RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CYSRT1A8MQ03 144 aa18.35■□□□□ 0.53
USF3-203ENST00000491165 RAB7AP51149 207 aa18.35■□□□□ 0.53
USF3-203ENST00000491165 REC114Q7Z4M0 266 aa18.35■□□□□ 0.53
USF3-203ENST00000491165 TMEM144Q7Z5S9 345 aa18.35■□□□□ 0.53
USF3-203ENST00000491165 LINC00574Q9H8X3 128 aa18.35■□□□□ 0.53
USF3-203ENST00000491165 NPVFQ9HCQ7 196 aa18.35■□□□□ 0.53
USF3-203ENST00000491165 ABCA1O95477 2261 aa18.35■□□□□ 0.53
USF3-203ENST00000491165 A0A087X0M5 115 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 A0A1B0GX30 115 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 ARF6P62330 175 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 LEAP2Q969E1 77 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 SFRP2Q96HF1 295 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 TET2Q6N021 2002 aaPredicted RBP18.34■□□□□ 0.53
USF3-203ENST00000491165 C15orf61A6NNL5 157 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 SLC31A2O15432 143 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 GCGP01275 180 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 CNN1P51911 297 aaKnown RBP18.34■□□□□ 0.53
USF3-203ENST00000491165 FOXL1Q12952 345 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 ZNF114Q8NC26 417 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 TMEM18Q96B42 140 aa18.34■□□□□ 0.53
USF3-203ENST00000491165 POLR3KQ9Y2Y1 108 aaPredicted RBP18.34■□□□□ 0.53
USF3-203ENST00000491165 LSM4Q9Y4Z0 139 aaKnown RBP18.34■□□□□ 0.53
USF3-203ENST00000491165 IGHV2-70DA0A0C4DH43 119 aa18.33■□□□□ 0.52
USF3-203ENST00000491165 A0A0U1RQK1 487 aa18.33■□□□□ 0.52
USF3-203ENST00000491165 MDFIC2A0A1B0GVS7 189 aa18.33■□□□□ 0.52
USF3-203ENST00000491165 ZNF320A2RRD8 509 aa18.33■□□□□ 0.52
USF3-203ENST00000491165 ITGB1BP1O14713 200 aa18.33■□□□□ 0.52
USF3-203ENST00000491165 FOXH1O75593 365 aa18.33■□□□□ 0.52
USF3-203ENST00000491165 LIPFP07098 398 aa18.33■□□□□ 0.52
USF3-203ENST00000491165 ONECUT1Q9UBC0 465 aa18.33■□□□□ 0.52
USF3-203ENST00000491165 CSPG4Q6UVK1 2322 aa18.33■□□□□ 0.52
USF3-203ENST00000491165 PGPEP1LA6NFU8 196 aa18.32■□□□□ 0.52
USF3-203ENST00000491165 RPL15P61313 204 aaKnown RBP18.32■□□□□ 0.52
USF3-203ENST00000491165 RAB9BQ9NP90 201 aa18.32■□□□□ 0.52
USF3-203ENST00000491165 C1orf229Q6ZS94 237 aaPredicted RBP18.32■□□□□ 0.52
USF3-203ENST00000491165 SSMEM1Q8WWF3 244 aa18.32■□□□□ 0.52
USF3-203ENST00000491165 GAL3ST2Q9H3Q3 398 aa18.32■□□□□ 0.52
USF3-203ENST00000491165 TRAPPC1Q9Y5R8 145 aa18.32■□□□□ 0.52
USF3-203ENST00000491165 TLN2Q9Y4G6 2542 aa18.32■□□□□ 0.52
USF3-203ENST00000491165 TRBV20OR9-2A0A075B6H5 130 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 SCO2A0A1W2PP80 73 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 IL6RP08887 468 aaPredicted RBP18.31■□□□□ 0.52
USF3-203ENST00000491165 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.31■□□□□ 0.52
USF3-203ENST00000491165 C1orf159Q96HA4 380 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 IDI2-AS1Q9NZ38 188 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 FOXA2Q9Y261 457 aaPredicted RBP18.31■□□□□ 0.52
USF3-203ENST00000491165 MSMBP08118 114 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 IGHV1-8P0DP01 117 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 NPY1RP25929 384 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 PRSS8Q16651 343 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 ARSJQ5FYB0 599 aaPredicted RBP18.31■□□□□ 0.52
USF3-203ENST00000491165 TEPPQ6URK8 271 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 SLC24A4Q8NFF2 622 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 ZNRD1Q9P1U0 126 aa18.31■□□□□ 0.52
USF3-203ENST00000491165 SAA2-SAA4A0A096LPE2 208 aa18.3■□□□□ 0.52
USF3-203ENST00000491165 ENSAO43768 121 aaKnown RBP18.3■□□□□ 0.52
USF3-203ENST00000491165 SAA2P0DJI9 122 aaPredicted RBP18.3■□□□□ 0.52
USF3-203ENST00000491165 CT45A1Q5HYN5 189 aa18.3■□□□□ 0.52
USF3-203ENST00000491165 OR4A47Q6IF82 309 aa18.3■□□□□ 0.52
USF3-203ENST00000491165 CT45A3Q8NHU0 189 aa18.3■□□□□ 0.52
USF3-203ENST00000491165 SGMS2Q8NHU3 365 aa18.3■□□□□ 0.52
USF3-203ENST00000491165 ENY2Q9NPA8 101 aa18.3■□□□□ 0.52
USF3-203ENST00000491165 TMEM14BQ9NUH8 114 aa18.3■□□□□ 0.52
USF3-203ENST00000491165 IGHV4-31P0DP07 118 aa18.29■□□□□ 0.52
USF3-203ENST00000491165 GCHFRP30047 84 aa18.29■□□□□ 0.52
USF3-203ENST00000491165 THBS3P49746 956 aa18.29■□□□□ 0.52
USF3-203ENST00000491165 RHOBP62745 196 aa18.29■□□□□ 0.52
USF3-203ENST00000491165 RAB31Q13636 194 aa18.29■□□□□ 0.52
USF3-203ENST00000491165 STPG3Q8N7X2 389 aa18.29■□□□□ 0.52
USF3-203ENST00000491165 YTHDF2Q9Y5A9 579 aaKnown RBP18.29■□□□□ 0.52
USF3-203ENST00000491165 INSIG2Q9Y5U4 225 aa18.29■□□□□ 0.52
USF3-203ENST00000491165 B4DSR2 109 aa18.29■□□□□ 0.52
USF3-203ENST00000491165 HSPE1P61604 102 aaKnown RBP18.29■□□□□ 0.52
USF3-203ENST00000491165 GBGT1Q8N5D6 347 aa18.29■□□□□ 0.52
USF3-203ENST00000491165 ZNF705GA8MUZ8 300 aaPredicted RBP18.28■□□□□ 0.52
USF3-203ENST00000491165 SMAD7O15105 426 aaKnown RBP18.28■□□□□ 0.52
USF3-203ENST00000491165 ZNF600Q6ZNG1 722 aa18.28■□□□□ 0.52
USF3-203ENST00000491165 NOL4LQ96MY1 436 aaPredicted RBP18.28■□□□□ 0.52
USF3-203ENST00000491165 SIRPDQ9H106 197 aa18.28■□□□□ 0.52
USF3-203ENST00000491165 MT-CO2P00403 227 aa18.28■□□□□ 0.52
USF3-203ENST00000491165 MRPL41Q8IXM3 137 aaKnown RBP18.28■□□□□ 0.52
USF3-203ENST00000491165 SEPSECSQ9HD40 501 aaKnown RBP18.28■□□□□ 0.52
USF3-203ENST00000491165 HIF1ANQ9NWT6 349 aa18.28■□□□□ 0.52
USF3-203ENST00000491165 RPL29P47914 159 aaKnown RBP18.27■□□□□ 0.52
USF3-203ENST00000491165 ZNF664Q8N3J9 261 aa18.27■□□□□ 0.52
USF3-203ENST00000491165 OR10G8Q8NGN5 311 aa18.27■□□□□ 0.52
USF3-203ENST00000491165 ADTRPQ96IZ2 230 aa18.27■□□□□ 0.52
USF3-203ENST00000491165 CUBNO60494 3623 aa18.27■□□□□ 0.51
USF3-203ENST00000491165 CA2P00918 260 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 GNG10P50151 68 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 SPATA31B1PQ5VZV4 182 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 TEX38Q6PEX7 206 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 LINC01356Q8N9X3 169 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 OCC1Q8TAD7 63 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 TNFRSF14Q92956 283 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 M0R1W7 72 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 KLRD1Q13241 179 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 VMO1Q7Z5L0 202 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 LYG1Q8N1E2 194 aa18.26■□□□□ 0.51
USF3-203ENST00000491165 ZNF439Q8NDP4 499 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms