RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ZNF562Q6V9R5 426 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 Q6ZS46 218 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 TREM1Q9NP99 234 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 PXMP4Q9Y6I8 212 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 UMAD1C9J7I0 102 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 LY86O95711 162 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 MT-CO2P00403 227 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 HAGHQ16775 308 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 MBD6Q96DN6 1003 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 DUX5Q96PT3 197 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 PSMG3Q9BT73 122 aaPredicted RBP11□□□□□ -0.65
SMPD4-219ENST00000491128 F11RQ9Y624 299 aaKnown RBP11□□□□□ -0.65
SMPD4-219ENST00000491128 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-219ENST00000491128 ATP6V0E1O15342 81 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 AMY1AP04745 511 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 SUB1P53999 127 aaKnown RBP eCLIP10.99□□□□□ -0.659e-7■■■□□ 17.7
SMPD4-219ENST00000491128 TMEM41BQ5BJD5 291 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 STPG3Q8N7X2 389 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 EIF5A2Q9GZV4 153 aaKnown RBP10.99□□□□□ -0.65
SMPD4-219ENST00000491128 OTOGQ6ZRI0 2925 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 IGHV4-59P01825 116 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 FBP1P09467 338 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 RAB5CP51148 216 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 BLCAPP62952 87 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 SERF2P84101 59 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 SPATA31B1PQ5VZV4 182 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 GGACTQ9BVM4 153 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 DOK5Q9P104 306 aa10.99□□□□□ -0.65
SMPD4-219ENST00000491128 INS-IGF2F8WCM5 200 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 HSD17B13Q7Z5P4 300 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-219ENST00000491128 GATAD1Q8WUU5 269 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 SLC35E1Q96K37 410 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 PARD6GQ9BYG4 376 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-219ENST00000491128 NF1P21359 2839 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 C17orf112F2Z3M2 114 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 SNRPCP09234 159 aaKnown RBP10.98□□□□□ -0.65
SMPD4-219ENST00000491128 GATA3P23771 443 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 TMEM144Q7Z5S9 345 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 C5orf56Q8N8D9 126 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 OR1P1Q8NH06 330 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 LYPD6BQ8NI32 183 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 MEGF9Q9H1U4 602 aa10.98□□□□□ -0.65
SMPD4-219ENST00000491128 SEPSECSQ9HD40 501 aaKnown RBP10.98□□□□□ -0.65
SMPD4-219ENST00000491128 ZFP92A6NM28 416 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 CEBPGP53567 150 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 CENPVQ7Z7K6 275 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-219ENST00000491128 RAB24Q969Q5 203 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 SLC39A9Q9NUM3 307 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 C1RLQ9NZP8 487 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 GNG13Q9P2W3 67 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 CYB5R2Q6BCY4 276 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 PRSS57Q6UWY2 283 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 MS4A10Q96PG2 267 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 RBM14Q96PK6 669 aaKnown RBP10.97□□□□□ -0.65
SMPD4-219ENST00000491128 ZNF355PQ9NSJ1 428 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 TIMM9Q9Y5J7 89 aa10.97□□□□□ -0.65
SMPD4-219ENST00000491128 IGKV1D-37A0A075B6S9 117 aa10.96□□□□□ -0.65
SMPD4-219ENST00000491128 MAP1LC3B2A6NCE7 125 aa10.96□□□□□ -0.65
SMPD4-219ENST00000491128 LINC00869P0C866 280 aa10.96□□□□□ -0.65
SMPD4-219ENST00000491128 UNQ5815/PRO19632Q6UWF5 114 aa10.96□□□□□ -0.65
SMPD4-219ENST00000491128 EIF4E3Q8N5X7 224 aaKnown RBP10.96□□□□□ -0.65
SMPD4-219ENST00000491128 RNASEH2CQ8TDP1 164 aaKnown RBP10.96□□□□□ -0.65
SMPD4-219ENST00000491128 NOL4LQ96MY1 436 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-219ENST00000491128 MAP1LC3BQ9GZQ8 125 aa10.96□□□□□ -0.65
SMPD4-219ENST00000491128 FAM74A7A6NL05 159 aa10.96□□□□□ -0.66
SMPD4-219ENST00000491128 OR2J3O76001 311 aa10.96□□□□□ -0.66
SMPD4-219ENST00000491128 ADCYAP1P18509 176 aa10.96□□□□□ -0.66
SMPD4-219ENST00000491128 PPT1P50897 306 aa10.96□□□□□ -0.66
SMPD4-219ENST00000491128 GUK1Q16774 197 aa10.96□□□□□ -0.66
SMPD4-219ENST00000491128 FAM74A3Q4VXF1 159 aa10.96□□□□□ -0.66
SMPD4-219ENST00000491128 CLRN3Q8NCR9 226 aa10.96□□□□□ -0.66
SMPD4-219ENST00000491128 FANCD2OSQ96PS1 177 aa10.96□□□□□ -0.66
SMPD4-219ENST00000491128 SMR3AQ99954 134 aa10.96□□□□□ -0.66
SMPD4-219ENST00000491128 SAV1Q9H4B6 383 aaPredicted RBP10.96□□□□□ -0.66
SMPD4-219ENST00000491128 APOC3P02656 99 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 TMEM95Q3KNT9 176 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 ZNF48Q96MX3 618 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-219ENST00000491128 UHRF2Q96PU4 802 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 SCRT1Q9BWW7 348 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 SLC45A2Q9UMX9 530 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 IGHV3-35A0A0C4DH35 117 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 I3L2K1 104 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 K7EIM0 57 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 HLA-DRB1P01911 266 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 IL34Q6ZMJ4 242 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 ZNF114Q8NC26 417 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 NANPQ8TBE9 248 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 MOB4Q9Y3A3 225 aa10.95□□□□□ -0.66
SMPD4-219ENST00000491128 ZNF98A6NK75 572 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 GPX4P36969 197 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-219ENST00000491128 CDC34P49427 236 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-219ENST00000491128 RAB31Q13636 194 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 KIAA0141Q14154 515 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-219ENST00000491128 ACOT6Q3I5F7 207 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-219ENST00000491128 MORN5Q5VZ52 161 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 RXFP4Q8TDU9 374 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 CACNG8Q8WXS5 425 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 A0A1W2PPV4 95 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 RAB19A4D1S5 217 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms