RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 RPS20P60866 119 aaKnown RBP4.73□□□□□ -1.65
VPS41-214ENST00000490924 ERHP84090 104 aaKnown RBP4.73□□□□□ -1.65
VPS41-214ENST00000490924 CD69Q07108 199 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 CENPWQ5EE01 88 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 CT45A1Q5HYN5 189 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 ETFRF1Q6IPR1 90 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 ZNF788Q6ZQV5 615 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 ZNF826PQ6ZT77 177 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 LRP11Q86VZ4 500 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 PDPNQ86YL7 162 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 TMEM256Q8N2U0 113 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 TMEM105Q8N8V8 129 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 OR2D3Q8NGH3 330 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 OR5AN1Q8NGI8 311 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 OR4P4Q8NGL7 312 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 OR1L6Q8NGR2 347 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 CT45A3Q8NHU0 189 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 TNFRSF14Q92956 283 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 STARD4Q96DR4 205 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 HSPB9Q9BQS6 159 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 SRSF8Q9BRL6 282 aaKnown RBP4.73□□□□□ -1.65
VPS41-214ENST00000490924 SAMD10Q9BYL1 202 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 DEFB127Q9H1M4 99 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 SAP30LQ9HAJ7 183 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 DNAJC4Q9NNZ3 241 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 NDUFA4L2Q9NRX3 87 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 RNF7Q9UBF6 113 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 RNF24Q9Y225 148 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 ZFP30Q9Y2G7 519 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 FAM186AA6NE01 2351 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 KIAA2026Q5HYC2 2103 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 SDK1Q7Z5N4 2213 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 LAMA1P25391 3075 aa4.73□□□□□ -1.65
VPS41-214ENST00000490924 SPEGQ15772 3267 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 A0A1B0GW15 77 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 A0A1W2PRX2 142 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 CORTO00230 105 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 IGLV2-8P01709 118 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 OR5AL1P0C617 328 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 RNF224P0DH78 156 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 RNASE2P10153 161 aaKnown RBP4.72□□□□□ -1.65
VPS41-214ENST00000490924 CBLN1P23435 193 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 MC5RP33032 325 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 MYCNOSP40205 109 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 LGALS7P47929 136 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 PLP1P60201 277 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 SUMO1P63165 101 aaKnown RBP4.72□□□□□ -1.65
VPS41-214ENST00000490924 OR5I1Q13606 314 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 PSG5Q15238 335 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 C3AR1Q16581 482 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 KRTCAP3Q53RY4 240 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 PSMG4Q5JS54 123 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 IBA57Q5T440 356 aaKnown RBP4.72□□□□□ -1.65
VPS41-214ENST00000490924 FAM180AQ6UWF9 173 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 ABHD12Q8N2K0 398 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 ARL6IP6Q8N6S5 226 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 C9orf106Q8NAJ2 232 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 OR4C13Q8NGP0 309 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 OR10X1Q8NGY0 326 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 RFESDQ8TAC1 157 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 UBALD1Q8TB05 177 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 TMEM167AQ8TBQ9 72 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 TSKUQ8WUA8 353 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 ORAOV1Q8WV07 137 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 TMEM186Q96B77 213 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 GRAMD2BQ96HH9 432 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 FAM167A-AS1Q96KT0 104 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 WFIKKN1Q96NZ8 548 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 TRIB1Q96RU8 372 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 CDIP1Q9H305 208 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 GNB4Q9HAV0 340 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 ZNF331Q9NQX6 463 aaPredicted RBP4.72□□□□□ -1.65
VPS41-214ENST00000490924 ZNF492Q9P255 531 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 NAT8BQ9UHF3 227 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 IL17BQ9UHF5 180 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 GVINP1Q7Z2Y8 2422 aa4.72□□□□□ -1.65
VPS41-214ENST00000490924 PTPRBP23467 1997 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 PTPRZ1P23471 2315 aaPredicted RBP4.71□□□□□ -1.66
VPS41-214ENST00000490924 DNAJC13O75165 2243 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 IGHV3-43A0A0B4J1X8 118 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 A0A0G2JNJ9 132 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 TEX50A0A1B0GTY4 177 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 TCRBV4S1A1TA0A5B7 111 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 NKX6-3A6NJ46 265 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 ZNF705FA8MVS1 300 aaPredicted RBP4.71□□□□□ -1.66
VPS41-214ENST00000490924 GGTLC3B5MD39 225 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 DIRC3C9JPN6 131 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 BMPR1BO00238 502 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 CDX4O14627 284 aaPredicted RBP4.71□□□□□ -1.66
VPS41-214ENST00000490924 APCSP02743 223 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 CRYGCP07315 174 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 SNRPCP09234 159 aaKnown RBP4.71□□□□□ -1.66
VPS41-214ENST00000490924 SP9P0CG40 484 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 ZNF705DP0CH99 300 aaPredicted RBP4.71□□□□□ -1.66
VPS41-214ENST00000490924 ZNF705BP0CI00 300 aaPredicted RBP4.71□□□□□ -1.66
VPS41-214ENST00000490924 CT45A6P0DMU7 189 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 CT45A5P0DMU8 189 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 CT45A7P0DMV0 189 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 IGLC2P0DOY2 106 aa4.71□□□□□ -1.66
VPS41-214ENST00000490924 IGLC3P0DOY3 106 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms