RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 PRSS22Q9GZN4 317 aa5.94□□□□□ -1.46
CLDN1-202ENST00000490800 HIPK2Q9H2X6 1198 aa5.94□□□□□ -1.46
CLDN1-202ENST00000490800 PLEKHA3Q9HB20 300 aa5.94□□□□□ -1.46
CLDN1-202ENST00000490800 ENY2Q9NPA8 101 aa5.94□□□□□ -1.46
CLDN1-202ENST00000490800 HEYLQ9NQ87 328 aaPredicted RBP5.94□□□□□ -1.46
CLDN1-202ENST00000490800 KIAA1456Q9P272 454 aa5.94□□□□□ -1.46
CLDN1-202ENST00000490800 PITPNC1Q9UKF7 332 aa5.94□□□□□ -1.46
CLDN1-202ENST00000490800 STRAPQ9Y3F4 350 aaKnown RBP5.94□□□□□ -1.46
CLDN1-202ENST00000490800 U3KQ87 197 aa5.94□□□□□ -1.46
CLDN1-202ENST00000490800 PRKDCP78527 4128 aaKnown RBP5.93□□□□□ -1.46
CLDN1-202ENST00000490800 A0A1W2PN81 502 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 C9orf118A6NHY6 69 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 INS-IGF2F8WCM5 200 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 CA2P00918 260 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 PRB2P02812 416 aaPredicted RBP5.93□□□□□ -1.46
CLDN1-202ENST00000490800 CHRNA7P36544 502 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 RPL27AP46776 148 aaKnown RBP5.93□□□□□ -1.46
CLDN1-202ENST00000490800 SLURP1P55000 103 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 GNB1P62873 340 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 RPP30P78346 268 aaKnown RBP5.93□□□□□ -1.46
CLDN1-202ENST00000490800 CLINT1Q14677 625 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 PLGLAQ15195 96 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 TNXAQ16473 311 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 BEAN1Q3B7T3 259 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 BSXQ3C1V8 233 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 Q8N9W7 124 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 ZNF680Q8NEM1 530 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 OR1S2Q8NGQ3 325 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 OR5C1Q8NGR4 320 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 CITED2Q99967 270 aaPredicted RBP5.93□□□□□ -1.46
CLDN1-202ENST00000490800 ARV1Q9H2C2 271 aa5.93□□□□□ -1.46
CLDN1-202ENST00000490800 PAIP2BQ9ULR5 123 aaKnown RBP5.93□□□□□ -1.46
CLDN1-202ENST00000490800 BORCS7-ASMTA0A0B4J1R7 106 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 IGLC7A0M8Q6 106 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 NCBP2LA6PVI3 153 aaKnown RBP5.92□□□□□ -1.46
CLDN1-202ENST00000490800 TEX22C9J3V5 150 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 PRSS46E5RG02 174 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 JTBO76095 146 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 ACTL6BO94805 426 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 IFNA10P01566 189 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 OR8U8P0C7N1 319 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 RNASE2P10153 161 aaKnown RBP5.92□□□□□ -1.46
CLDN1-202ENST00000490800 TPT1P13693 172 aaKnown RBP5.92□□□□□ -1.46
CLDN1-202ENST00000490800 NPY1RP25929 384 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 HBG1P69891 147 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 HBG2P69892 147 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 WT1-ASQ06250 92 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 SLC38A11Q08AI6 406 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 EXOSC2Q13868 293 aaKnown RBP5.92□□□□□ -1.46
CLDN1-202ENST00000490800 TMEM95Q3KNT9 176 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 OR8G2PQ6IF36 304 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 ZNF767PQ75MW2 155 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 BAP18Q8IXM2 172 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 UBAC2Q8NBM4 344 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 SLC24A4Q8NFF2 622 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 OR5AU1Q8NGC0 362 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 WIPF2Q8TF74 440 aaPredicted RBP5.92□□□□□ -1.46
CLDN1-202ENST00000490800 SRSF12Q8WXF0 261 aaKnown RBP5.92□□□□□ -1.46
CLDN1-202ENST00000490800 ATP5SQ99766 215 aa5.92□□□□□ -1.46
CLDN1-202ENST00000490800 DFFBO76075 338 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 CNIH1O95406 144 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 IFNA7P01567 189 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 OR13C7P0DN81 318 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 AREGP15514 252 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 HTR2BP41595 481 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 ATP5IP56385 69 aaPredicted RBP5.91□□□□□ -1.46
CLDN1-202ENST00000490800 RAB11AP62491 216 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 EIF5AP63241 154 aaKnown RBP5.91□□□□□ -1.46
CLDN1-202ENST00000490800 CX3CL1P78423 397 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 ERHP84090 104 aaKnown RBP5.91□□□□□ -1.46
CLDN1-202ENST00000490800 NDPQ00604 133 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 FXYD3Q14802 87 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 ATP6V1FQ16864 119 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 RNF151Q2KHN1 245 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 C2orf83Q53S99 150 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 KPRPQ5T749 579 aaPredicted RBP5.91□□□□□ -1.46
CLDN1-202ENST00000490800 ALKAL2Q6UX46 152 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 ZNF562Q6V9R5 426 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 CENPVQ7Z7K6 275 aaPredicted RBP5.91□□□□□ -1.46
CLDN1-202ENST00000490800 NDUFA11Q86Y39 141 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 C5orf56Q8N8D9 126 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 OR4F17Q8NGA8 305 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 OR10P1Q8NGE3 313 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 RBM14Q96PK6 669 aaKnown RBP5.91□□□□□ -1.46
CLDN1-202ENST00000490800 OR4F4Q96R69 305 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 SRSF8Q9BRL6 282 aaKnown RBP5.91□□□□□ -1.46
CLDN1-202ENST00000490800 GINS3Q9BRX5 216 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 SLC25A33Q9BSK2 321 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 TMEM147Q9BVK8 224 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 MOB4Q9Y3A3 225 aa5.91□□□□□ -1.46
CLDN1-202ENST00000490800 IGHV7-81A0A0B4J1V7 117 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 A0A1W2PRX2 142 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 SH2D7A6NKC9 451 aaPredicted RBP5.9□□□□□ -1.46
CLDN1-202ENST00000490800 SCAF4O95104 1147 aaKnown RBP5.9□□□□□ -1.46
CLDN1-202ENST00000490800 HLA-DRB1P01911 266 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 AMY1AP04745 511 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 IFNA4P05014 189 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 REG1AP05451 166 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 APELAP0DMC3 54 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 EGR2P11161 476 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms