RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 GPR132Q9UNW8 380 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 A0A0J9YWU9 116 aa20.5■□□□□ 0.87
HOXB3-211ENST00000490677 RPL35AP18077 110 aaKnown RBP20.5■□□□□ 0.87
HOXB3-211ENST00000490677 SURF2Q15527 256 aaPredicted RBP20.5■□□□□ 0.87
HOXB3-211ENST00000490677 ZNF600Q6ZNG1 722 aa20.5■□□□□ 0.87
HOXB3-211ENST00000490677 RRNAD1Q96FB5 475 aaKnown RBP20.5■□□□□ 0.87
HOXB3-211ENST00000490677 PUS1Q9Y606 427 aaKnown RBP eCLIP20.5■□□□□ 0.87
HOXB3-211ENST00000490677 TEX13DA0A0J9YY54 714 aaPredicted RBP20.49■□□□□ 0.87
HOXB3-211ENST00000490677 BMI1P35226 326 aa20.49■□□□□ 0.87
HOXB3-211ENST00000490677 LYG2Q86SG7 212 aa20.49■□□□□ 0.87
HOXB3-211ENST00000490677 SELENOHQ8IZQ5 122 aaKnown RBP20.49■□□□□ 0.87
HOXB3-211ENST00000490677 RAB2BQ8WUD1 216 aa20.49■□□□□ 0.87
HOXB3-211ENST00000490677 CORTO00230 105 aa20.48■□□□□ 0.87
HOXB3-211ENST00000490677 RPL5P46777 297 aaKnown RBP20.48■□□□□ 0.87
HOXB3-211ENST00000490677 TFPI2P48307 235 aa20.48■□□□□ 0.87
HOXB3-211ENST00000490677 HOXA1P49639 335 aaPredicted RBP20.48■□□□□ 0.87
HOXB3-211ENST00000490677 TCF24Q7RTU0 167 aa20.48■□□□□ 0.87
HOXB3-211ENST00000490677 FAM219AQ8IW50 185 aa20.48■□□□□ 0.87
HOXB3-211ENST00000490677 OR52E5Q8NH55 327 aa20.48■□□□□ 0.87
HOXB3-211ENST00000490677 DIRAS2Q96HU8 199 aa20.48■□□□□ 0.87
HOXB3-211ENST00000490677 GINS3Q9BRX5 216 aa20.48■□□□□ 0.87
HOXB3-211ENST00000490677 PDCD10Q9BUL8 212 aa20.48■□□□□ 0.87
HOXB3-211ENST00000490677 IGKV3-7A0A075B6H7 116 aa20.47■□□□□ 0.87
HOXB3-211ENST00000490677 CRYM-AS1A6NIL9 109 aa20.47■□□□□ 0.87
HOXB3-211ENST00000490677 AKAIN1P0CW23 69 aa20.47■□□□□ 0.87
HOXB3-211ENST00000490677 TMBIM6P55061 237 aa20.47■□□□□ 0.87
HOXB3-211ENST00000490677 SPCS3P61009 180 aa20.47■□□□□ 0.87
HOXB3-211ENST00000490677 GBGT1Q8N5D6 347 aa20.47■□□□□ 0.87
HOXB3-211ENST00000490677 STPG3Q8N7X2 389 aa20.47■□□□□ 0.87
HOXB3-211ENST00000490677 RBPMSQ93062 196 aaKnown RBP20.47■□□□□ 0.87
HOXB3-211ENST00000490677 SOSTQ9BQB4 213 aa20.47■□□□□ 0.87
HOXB3-211ENST00000490677 BCL7BQ9BQE9 202 aa20.47■□□□□ 0.87
HOXB3-211ENST00000490677 C14orf166Q9Y224 244 aaKnown RBP20.47■□□□□ 0.87
HOXB3-211ENST00000490677 ANKRD20A5PA0PJZ0 165 aa20.46■□□□□ 0.87
HOXB3-211ENST00000490677 DISC1C4P0D8 188 aa20.46■□□□□ 0.87
HOXB3-211ENST00000490677 CLN5O75503 358 aa20.46■□□□□ 0.87
HOXB3-211ENST00000490677 SUB1P53999 127 aaKnown RBP eCLIP20.46■□□□□ 0.87
HOXB3-211ENST00000490677 OR4X1Q8NH49 305 aa20.46■□□□□ 0.87
HOXB3-211ENST00000490677 TMEM230Q96A57 120 aa20.46■□□□□ 0.87
HOXB3-211ENST00000490677 GPR146Q96CH1 333 aa20.46■□□□□ 0.87
HOXB3-211ENST00000490677 SLIRPQ9GZT3 109 aaKnown RBP20.46■□□□□ 0.87
HOXB3-211ENST00000490677 GSTZ1O43708 216 aaPredicted RBP20.45■□□□□ 0.86
HOXB3-211ENST00000490677 DFFBO76075 338 aa20.45■□□□□ 0.86
HOXB3-211ENST00000490677 JTBO76095 146 aa20.45■□□□□ 0.86
HOXB3-211ENST00000490677 IGKV1-17P01599 117 aa20.45■□□□□ 0.86
HOXB3-211ENST00000490677 IL18Q14116 193 aa20.45■□□□□ 0.86
HOXB3-211ENST00000490677 OR51S1Q8NGJ8 323 aa20.45■□□□□ 0.86
HOXB3-211ENST00000490677 TMEM170AQ8WVE7 144 aa20.45■□□□□ 0.86
HOXB3-211ENST00000490677 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.45■□□□□ 0.86
HOXB3-211ENST00000490677 TMEM56-RWDD3S4R434 201 aa20.45■□□□□ 0.86
HOXB3-211ENST00000490677 IGHV3-66A0A0C4DH42 116 aa20.44■□□□□ 0.86
HOXB3-211ENST00000490677 DHODHQ02127 395 aa20.44■□□□□ 0.86
HOXB3-211ENST00000490677 FAM24BQ8N5W8 94 aa20.44■□□□□ 0.86
HOXB3-211ENST00000490677 RNASE11Q8TAA1 199 aaKnown RBP20.44■□□□□ 0.86
HOXB3-211ENST00000490677 MS4A6AQ9H2W1 248 aa20.44■□□□□ 0.86
HOXB3-211ENST00000490677 RABL2AQ9UBK7 228 aaPredicted RBP20.44■□□□□ 0.86
HOXB3-211ENST00000490677 CACNG5Q9UF02 275 aa20.44■□□□□ 0.86
HOXB3-211ENST00000490677 RABL2BQ9UNT1 228 aa20.44■□□□□ 0.86
HOXB3-211ENST00000490677 CD5P06127 495 aa20.43■□□□□ 0.86
HOXB3-211ENST00000490677 ATF4P18848 351 aaPredicted RBP20.43■□□□□ 0.86
HOXB3-211ENST00000490677 OPRK1P41145 380 aa20.43■□□□□ 0.86
HOXB3-211ENST00000490677 CMC4P56277 68 aaPredicted RBP20.43■□□□□ 0.86
HOXB3-211ENST00000490677 PRRT1Q99946 306 aa20.43■□□□□ 0.86
HOXB3-211ENST00000490677 ENY2Q9NPA8 101 aa20.43■□□□□ 0.86
HOXB3-211ENST00000490677 KMT2AQ03164 3969 aa20.43■□□□□ 0.86
HOXB3-211ENST00000490677 TMEM268Q5VZI3 342 aa20.42■□□□□ 0.86
HOXB3-211ENST00000490677 TRAV2A0A0B4J234 112 aa20.41■□□□□ 0.86
HOXB3-211ENST00000490677 H3BMQ9 156 aa20.41■□□□□ 0.86
HOXB3-211ENST00000490677 CRYBB3P26998 211 aa20.41■□□□□ 0.86
HOXB3-211ENST00000490677 HTR2BP41595 481 aa20.41■□□□□ 0.86
HOXB3-211ENST00000490677 TMEM187Q14656 261 aa20.41■□□□□ 0.86
HOXB3-211ENST00000490677 C2orf83Q53S99 150 aa20.41■□□□□ 0.86
HOXB3-211ENST00000490677 CSTL1Q9H114 145 aa20.41■□□□□ 0.86
HOXB3-211ENST00000490677 PRR13Q9NZ81 148 aa20.41■□□□□ 0.86
HOXB3-211ENST00000490677 SUPT4H1P63272 117 aaKnown RBP20.4■□□□□ 0.86
HOXB3-211ENST00000490677 PMS2P11Q13670 270 aa20.4■□□□□ 0.86
HOXB3-211ENST00000490677 TIGITQ495A1 244 aa20.4■□□□□ 0.86
HOXB3-211ENST00000490677 C6orf62Q9GZU0 229 aaPredicted RBP20.4■□□□□ 0.86
HOXB3-211ENST00000490677 TNFSF8P32971 234 aa20.39■□□□□ 0.85
HOXB3-211ENST00000490677 PAFAH1B2P68402 229 aa20.39■□□□□ 0.85
HOXB3-211ENST00000490677 PRSS54Q6PEW0 395 aa20.39■□□□□ 0.85
HOXB3-211ENST00000490677 U3KQE9 123 aa20.39■□□□□ 0.85
HOXB3-211ENST00000490677 IGLC1P0CG04 106 aa20.38■□□□□ 0.85
HOXB3-211ENST00000490677 NPPCP23582 126 aa20.38■□□□□ 0.85
HOXB3-211ENST00000490677 NMSQ5H8A3 153 aa20.38■□□□□ 0.85
HOXB3-211ENST00000490677 IL22RA2Q969J5 263 aa20.38■□□□□ 0.85
HOXB3-211ENST00000490677 HEYLQ9NQ87 328 aaPredicted RBP20.38■□□□□ 0.85
HOXB3-211ENST00000490677 RSL24D1Q9UHA3 163 aaKnown RBP20.38■□□□□ 0.85
HOXB3-211ENST00000490677 CXorf65A6NEN9 183 aa20.37■□□□□ 0.85
HOXB3-211ENST00000490677 MPTX1A8MV57 137 aa20.37■□□□□ 0.85
HOXB3-211ENST00000490677 SLC24A4Q8NFF2 622 aa20.37■□□□□ 0.85
HOXB3-211ENST00000490677 LINC00476Q8WZB0 136 aa20.37■□□□□ 0.85
HOXB3-211ENST00000490677 K7EQG2 157 aa20.36■□□□□ 0.85
HOXB3-211ENST00000490677 NXPH3O95157 252 aa20.36■□□□□ 0.85
HOXB3-211ENST00000490677 DEFB131AP59861 70 aa20.36■□□□□ 0.85
HOXB3-211ENST00000490677 LEMD1Q68G75 181 aa20.36■□□□□ 0.85
HOXB3-211ENST00000490677 RNASEH2CQ8TDP1 164 aaKnown RBP20.36■□□□□ 0.85
HOXB3-211ENST00000490677 METTL26Q96S19 204 aa20.36■□□□□ 0.85
HOXB3-211ENST00000490677 TRAV30A0A087WSZ9 112 aa20.35■□□□□ 0.85
HOXB3-211ENST00000490677 P2RY1P47900 373 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms