RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	H2AFB2	P0C5Z0	115 aa		14.06	□□□□□ -0.16
C4A-256	ENST00000490663	NPY1R	P25929	384 aa		14.06	□□□□□ -0.16
C4A-256	ENST00000490663	HTR2B	P41595	481 aa		14.06	□□□□□ -0.16
C4A-256	ENST00000490663	PVRIG	Q6DKI7	326 aa		14.06	□□□□□ -0.16
C4A-256	ENST00000490663	COQ8A	Q8NI60	647 aa		14.06	□□□□□ -0.16
C4A-256	ENST00000490663	TMEM190	Q8WZ59	177 aa		14.06	□□□□□ -0.16
C4A-256	ENST00000490663	TMED3	Q9Y3Q3	217 aa		14.06	□□□□□ -0.16
C4A-256	ENST00000490663	IFNA10	P01566	189 aa		14.05	□□□□□ -0.16
C4A-256	ENST00000490663	CD300E	Q496F6	205 aa	Predicted RBP	14.05	□□□□□ -0.16
C4A-256	ENST00000490663	C2orf83	Q53S99	150 aa		14.05	□□□□□ -0.16
C4A-256	ENST00000490663	BTNL8	Q6UX41	500 aa		14.05	□□□□□ -0.16
C4A-256	ENST00000490663	HIPK2	Q9H2X6	1198 aa		14.05	□□□□□ -0.16
C4A-256	ENST00000490663	MLX	Q9UH92	298 aa		14.05	□□□□□ -0.16
C4A-256	ENST00000490663	IGHV3-49	A0A0A0MS15	119 aa		14.04	□□□□□ -0.16
C4A-256	ENST00000490663	NUPL2	O15504	423 aa	Known RBP	14.04	□□□□□ -0.16
C4A-256	ENST00000490663	CBLN1	P23435	193 aa		14.04	□□□□□ -0.16
C4A-256	ENST00000490663	MZT2B	Q6NZ67	158 aa		14.04	□□□□□ -0.16
C4A-256	ENST00000490663	SPSB3	Q6PJ21	355 aa		14.04	□□□□□ -0.16
C4A-256	ENST00000490663	UXS1	Q8NBZ7	420 aa		14.04	□□□□□ -0.16
C4A-256	ENST00000490663	DUSP18	Q8NEJ0	188 aa		14.04	□□□□□ -0.16
C4A-256	ENST00000490663	ZMAT5	Q9UDW3	170 aa	Known RBP	14.04	□□□□□ -0.16
C4A-256	ENST00000490663	LSM4	Q9Y4Z0	139 aa	Known RBP	14.04	□□□□□ -0.16
C4A-256	ENST00000490663	CORT	O00230	105 aa		14.03	□□□□□ -0.16
C4A-256	ENST00000490663	WRB	O00258	174 aa		14.03	□□□□□ -0.16
C4A-256	ENST00000490663	DEFB114	Q30KQ6	69 aa		14.03	□□□□□ -0.16
C4A-256	ENST00000490663	ENKUR	Q8TC29	256 aa		14.03	□□□□□ -0.16
C4A-256	ENST00000490663	WDR89	Q96FK6	387 aa	Predicted RBP	14.03	□□□□□ -0.16
C4A-256	ENST00000490663	OR10C1	Q96KK4	312 aa		14.03	□□□□□ -0.16
C4A-256	ENST00000490663	SIGLEC8	Q9NYZ4	499 aa		14.03	□□□□□ -0.16
C4A-256	ENST00000490663	PAIP2B	Q9ULR5	123 aa	Known RBP	14.03	□□□□□ -0.16
C4A-256	ENST00000490663		H3BP45	60 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	NDUFA4	O00483	81 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	YIF1A	O95070	293 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	TMEM50A	O95807	157 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	SCGB1D2	O95969	90 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	SLC25A6	P12236	298 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	FCGR2B	P31994	310 aa	Predicted RBP	14.02	□□□□□ -0.17
C4A-256	ENST00000490663	RND2	P52198	227 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	TIGIT	Q495A1	244 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	MITD1	Q8WV92	249 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	TXN2	Q99757	166 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	UFC1	Q9Y3C8	167 aa		14.02	□□□□□ -0.17
C4A-256	ENST00000490663	IGHV3OR16-13	A0A075B7E8	117 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	IGHV3-74	A0A0B4J1X5	117 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	PIGBOS1	A0A0B4J2F0	54 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	C15orf62	A8K5M9	175 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	SCAF4	O95104	1147 aa	Known RBP	14.01	□□□□□ -0.17
C4A-256	ENST00000490663	NPBWR1	P48145	328 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	POLR2G	P62487	172 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
C4A-256	ENST00000490663	GUCA2B	Q16661	112 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	LCN12	Q6JVE5	192 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	NRARP	Q7Z6K4	114 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	TMEM61	Q8N0U2	210 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	ACY3	Q96HD9	319 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	ATP6V0B	Q99437	205 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	PALMD	Q9NP74	551 aa		14.01	□□□□□ -0.17
C4A-256	ENST00000490663	SYNGR2	O43760	224 aa		14	□□□□□ -0.17
C4A-256	ENST00000490663	CLN5	O75503	358 aa		14	□□□□□ -0.17
C4A-256	ENST00000490663	IFNA21	P01568	189 aa		14	□□□□□ -0.17
C4A-256	ENST00000490663	IFNA4	P05014	189 aa		14	□□□□□ -0.17
C4A-256	ENST00000490663	REL	Q04864	619 aa	Predicted RBP	14	□□□□□ -0.17
C4A-256	ENST00000490663	IAH1	Q2TAA2	248 aa	Predicted RBP	14	□□□□□ -0.17
C4A-256	ENST00000490663	PRSS54	Q6PEW0	395 aa		14	□□□□□ -0.17
C4A-256	ENST00000490663	SLC16A13	Q7RTY0	426 aa		14	□□□□□ -0.17
C4A-256	ENST00000490663	OR4D5	Q8NGN0	318 aa		14	□□□□□ -0.17
C4A-256	ENST00000490663	RNASEH2C	Q8TDP1	164 aa	Known RBP	14	□□□□□ -0.17
C4A-256	ENST00000490663	ZNF431	Q8TF32	576 aa	Predicted RBP	14	□□□□□ -0.17
C4A-256	ENST00000490663	ASCL2	Q99929	193 aa		14	□□□□□ -0.17
C4A-256	ENST00000490663	WFDC10A	Q9H1F0	79 aa		14	□□□□□ -0.17
C4A-256	ENST00000490663	GAR1	Q9NY12	217 aa	Known RBP	14	□□□□□ -0.17
C4A-256	ENST00000490663	DNAH9	Q9NYC9	4486 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	ZNF785	A8K8V0	405 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	FAM25E	A8MYX2	175 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	FAM90A26	D6RGX4	464 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	SSSCA1	O60232	199 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	TOMM20L	Q6UXN7	152 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663		Q8N1Y9	231 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.99	□□□□□ -0.17
C4A-256	ENST00000490663	OR4X1	Q8NH49	305 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	ZFAND3	Q9H8U3	227 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	DAZ1	Q9NQZ3	744 aa	Known RBP	13.99	□□□□□ -0.17
C4A-256	ENST00000490663	GSKIP	Q9P0R6	139 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
C4A-256	ENST00000490663	AGRN	O00468	2067 aa		13.99	□□□□□ -0.17
C4A-256	ENST00000490663	MED6	O75586	246 aa		13.98	□□□□□ -0.17
C4A-256	ENST00000490663	C8orf88	P0DMB2	117 aa		13.98	□□□□□ -0.17
C4A-256	ENST00000490663	NKX2-1	P43699	371 aa	Predicted RBP	13.98	□□□□□ -0.17
C4A-256	ENST00000490663	ELL	P55199	621 aa	Predicted RBP	13.98	□□□□□ -0.17
C4A-256	ENST00000490663	CD69	Q07108	199 aa		13.98	□□□□□ -0.17
C4A-256	ENST00000490663	ZNF600	Q6ZNG1	722 aa		13.98	□□□□□ -0.17
C4A-256	ENST00000490663	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.98	□□□□□ -0.17
C4A-256	ENST00000490663	NPIPB3	Q92617	1050 aa		13.98	□□□□□ -0.17
C4A-256	ENST00000490663	MRPL27	Q9P0M9	148 aa	Known RBP	13.98	□□□□□ -0.17
C4A-256	ENST00000490663	CACFD1	Q9UGQ2	172 aa		13.98	□□□□□ -0.17
C4A-256	ENST00000490663	SMAD5-AS1	Q9Y6J3	95 aa		13.98	□□□□□ -0.17
C4A-256	ENST00000490663		U3KQ87	197 aa		13.98	□□□□□ -0.17
C4A-256	ENST00000490663	IGHV3-66	A0A0C4DH42	116 aa		13.97	□□□□□ -0.17
C4A-256	ENST00000490663	IGKV1-17	P01599	117 aa		13.97	□□□□□ -0.17
C4A-256	ENST00000490663	APOH	P02749	345 aa	Predicted RBP	13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms