RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 BSXQ3C1V8 233 aa14.76□□□□□ -0.05
SMC4-222ENST00000490207 HIPK2Q9H2X6 1198 aa14.76□□□□□ -0.05
SMC4-222ENST00000490207 EDA2RQ9HAV5 297 aa14.76□□□□□ -0.05
SMC4-222ENST00000490207 SMPXQ9UHP9 88 aa14.76□□□□□ -0.05
SMC4-222ENST00000490207 CCDC190Q86UF4 302 aa14.75□□□□□ -0.05
SMC4-222ENST00000490207 TMEM116Q8NCL8 245 aa14.75□□□□□ -0.05
SMC4-222ENST00000490207 GINS3Q9BRX5 216 aa14.75□□□□□ -0.05
SMC4-222ENST00000490207 FNDC4Q9H6D8 234 aaPredicted RBP14.75□□□□□ -0.05
SMC4-222ENST00000490207 CEBPZOSA8MTT3 80 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 CHEK1O14757 476 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 NXPH3O95157 252 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 SULT1A3P0DMM9 295 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 SULT1A4P0DMN0 295 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 ANXA3P12429 323 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 HTR2BP41595 481 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 SUPT4H1P63272 117 aaKnown RBP14.74□□□□□ -0.05
SMC4-222ENST00000490207 ZNF600Q6ZNG1 722 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 FAM110AQ9BQ89 295 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 RHPN1-AS1Q9BWJ2 59 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 GGTLC1Q9BX51 225 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 HEYLQ9NQ87 328 aaPredicted RBP14.74□□□□□ -0.05
SMC4-222ENST00000490207 UBQLN2Q9UHD9 624 aa14.74□□□□□ -0.05
SMC4-222ENST00000490207 IGHV3-49A0A0A0MS15 119 aa14.73□□□□□ -0.05
SMC4-222ENST00000490207 TRAV14DV4A0A0A6YYC5 116 aa14.73□□□□□ -0.05
SMC4-222ENST00000490207 OR4C46A6NHA9 309 aa14.73□□□□□ -0.05
SMC4-222ENST00000490207 SRPXP78539 464 aa14.73□□□□□ -0.05
SMC4-222ENST00000490207 CASC10Q5T4H9 136 aa14.73□□□□□ -0.05
SMC4-222ENST00000490207 TOMM20LQ6UXN7 152 aa14.73□□□□□ -0.05
SMC4-222ENST00000490207 SLC24A4Q8NFF2 622 aa14.73□□□□□ -0.05
SMC4-222ENST00000490207 RNF2Q99496 336 aa14.73□□□□□ -0.05
SMC4-222ENST00000490207 MRPL36Q9P0J6 103 aaKnown RBP14.73□□□□□ -0.05
SMC4-222ENST00000490207 LOC102724200A0A096LPH7 203 aaPredicted RBP14.72□□□□□ -0.05
SMC4-222ENST00000490207 A0A0B4J2A0 478 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 CLN5O75503 358 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 SCGB2A1O75556 95 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 TMEM50AO95807 157 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 LYL1P12980 280 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 SPANXN2Q5MJ10 180 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 TMED4Q7Z7H5 227 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 LGI3Q8N145 548 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 DEDD2Q8WXF8 326 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 ZFAND3Q9H8U3 227 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 CACFD1Q9UGQ2 172 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 SHPKQ9UHJ6 478 aa14.72□□□□□ -0.05
SMC4-222ENST00000490207 PUS1Q9Y606 427 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMC4-222ENST00000490207 IGHV3OR16-13A0A075B7E8 117 aa14.71□□□□□ -0.05
SMC4-222ENST00000490207 IGHV3-74A0A0B4J1X5 117 aa14.71□□□□□ -0.05
SMC4-222ENST00000490207 RPS10-NUDT3A0A1W2PQS6 291 aa14.71□□□□□ -0.05
SMC4-222ENST00000490207 BMI1P35226 326 aa14.71□□□□□ -0.05
SMC4-222ENST00000490207 CCR6P51684 374 aa14.71□□□□□ -0.05
SMC4-222ENST00000490207 ODF3L2Q3SX64 289 aa14.71□□□□□ -0.05
SMC4-222ENST00000490207 C2orf83Q53S99 150 aa14.71□□□□□ -0.05
SMC4-222ENST00000490207 NMSQ5H8A3 153 aa14.71□□□□□ -0.05
SMC4-222ENST00000490207 LYZL2Q7Z4W2 148 aa14.71□□□□□ -0.05
SMC4-222ENST00000490207 OR4X1Q8NH49 305 aa14.71□□□□□ -0.05
SMC4-222ENST00000490207 DYNC2H1Q8NCM8 4307 aaKnown RBP14.71□□□□□ -0.06
SMC4-222ENST00000490207 SMCO1Q147U7 214 aa14.7□□□□□ -0.06
SMC4-222ENST00000490207 MLANAQ16655 118 aa14.7□□□□□ -0.06
SMC4-222ENST00000490207 SRRQ9GZT4 340 aa14.7□□□□□ -0.06
SMC4-222ENST00000490207 NBEAL2Q6ZNJ1 2754 aa14.69□□□□□ -0.06
SMC4-222ENST00000490207 STARD9Q9P2P6 4700 aa14.69□□□□□ -0.06
SMC4-222ENST00000490207 PIGBOS1A0A0B4J2F0 54 aa14.69□□□□□ -0.06
SMC4-222ENST00000490207 A0A1B0GU03 582 aa14.69□□□□□ -0.06
SMC4-222ENST00000490207 NPY1RP25929 384 aa14.69□□□□□ -0.06
SMC4-222ENST00000490207 TNFRSF9Q07011 255 aa14.69□□□□□ -0.06
SMC4-222ENST00000490207 TMEM128Q5BJH2 165 aa14.69□□□□□ -0.06
SMC4-222ENST00000490207 RNASEH2CQ8TDP1 164 aaKnown RBP14.69□□□□□ -0.06
SMC4-222ENST00000490207 ST8SIA2Q92186 375 aa14.69□□□□□ -0.06
SMC4-222ENST00000490207 SLC25A21Q9BQT8 299 aaPredicted RBP14.69□□□□□ -0.06
SMC4-222ENST00000490207 IGKV3-7A0A075B6H7 116 aa14.68□□□□□ -0.06
SMC4-222ENST00000490207 TFPI2P48307 235 aa14.68□□□□□ -0.06
SMC4-222ENST00000490207 ZFAND6Q6FIF0 208 aa14.68□□□□□ -0.06
SMC4-222ENST00000490207 TCF24Q7RTU0 167 aa14.68□□□□□ -0.06
SMC4-222ENST00000490207 TMEM170AQ8WVE7 144 aa14.68□□□□□ -0.06
SMC4-222ENST00000490207 VSIRQ9H7M9 311 aa14.68□□□□□ -0.06
SMC4-222ENST00000490207 HSPB7Q9UBY9 170 aa14.68□□□□□ -0.06
SMC4-222ENST00000490207 RYR3Q15413 4870 aa14.68□□□□□ -0.06
SMC4-222ENST00000490207 TRAV30A0A087WSZ9 112 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 DUXBA0A1W2PPF3 345 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 APOHP02749 345 aaPredicted RBP14.67□□□□□ -0.06
SMC4-222ENST00000490207 SLC25A4P12235 298 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 VAMP1P23763 118 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 RND2P52198 227 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 TIGITQ495A1 244 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 FAM90A2PQ658T7 463 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 NOXA1Q86UR1 476 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 OR1S2Q8NGQ3 325 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 OR1S1Q8NH92 325 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 DTD1Q8TEA8 209 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 RBKSQ9H477 322 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 TMEM231Q9H6L2 316 aa14.67□□□□□ -0.06
SMC4-222ENST00000490207 CSMD3Q7Z407 3707 aa14.66□□□□□ -0.06
SMC4-222ENST00000490207 IGHV3-66A0A0C4DH42 116 aa14.66□□□□□ -0.06
SMC4-222ENST00000490207 IFNA10P01566 189 aa14.66□□□□□ -0.06
SMC4-222ENST00000490207 IGKV1-17P01599 117 aa14.66□□□□□ -0.06
SMC4-222ENST00000490207 CD5P06127 495 aa14.66□□□□□ -0.06
SMC4-222ENST00000490207 INPP1P49441 399 aa14.66□□□□□ -0.06
SMC4-222ENST00000490207 APOC4P55056 127 aa14.66□□□□□ -0.06
SMC4-222ENST00000490207 TRIQKQ629K1 86 aa14.66□□□□□ -0.06
SMC4-222ENST00000490207 ETFRF1Q6IPR1 90 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms