RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 S100PP25815 95 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 S100A7P31151 101 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 SRP9P49458 86 aaKnown RBP0.62□□□□□ -2.31
CCDC39-206ENST00000489868 EVX1P49640 407 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 TCTAP57738 103 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 CDC42P60953 191 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 HIST1H4AP62805 103 aaKnown RBP0.62□□□□□ -2.31
CCDC39-206ENST00000489868 GNG3P63215 75 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 IFITM2Q01629 132 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 PPP1R1AQ13522 171 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 OR2F1Q13607 317 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 EDDM3AQ14507 147 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 EBPQ15125 230 aaKnown RBP0.62□□□□□ -2.31
CCDC39-206ENST00000489868 CDK10Q15131 360 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 RSU1Q15404 277 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 HIST3H3Q16695 136 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 WHAMMP3Q1A5X7 153 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 SMIM21Q3B7S5 101 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 HIST2H3PS2Q5TEC6 136 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 C1orf195Q5TG92 126 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 C4orf22Q6V702 233 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 C3orf62Q6ZUJ4 267 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 GRINAQ7Z429 371 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 UMODL1-AS1Q8N2C9 162 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 LRRC25Q8N386 305 aaPredicted RBP0.62□□□□□ -2.31
CCDC39-206ENST00000489868 SMIM20Q8N5G0 67 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 ZNF676Q8N7Q3 588 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 GPR32P1Q8NGA4 272 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 OR8J3Q8NGG0 315 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 OR13C6PQ8NH95 151 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 SGMS2Q8NHU3 365 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 GRPEL2Q8TAA5 225 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 EEF1AKMT1Q8WVE0 214 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 SKA2Q8WVK7 121 aaPredicted RBP0.62□□□□□ -2.31
CCDC39-206ENST00000489868 ASB13Q8WXK3 278 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 DNAJC9Q8WXX5 260 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 C11orf40Q8WZ69 217 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 GNPNAT1Q96EK6 184 aaPredicted RBP0.62□□□□□ -2.31
CCDC39-206ENST00000489868 PPP1R2P1Q96PQ5 205 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 C12orf57Q99622 126 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 GINS3Q9BRX5 216 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 C2orf88Q9BSF0 95 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 CCDC32Q9BV29 185 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 KIFC1Q9BW19 673 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 CCDC90BQ9GZT6 254 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 DCSTAMPQ9H295 470 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 MIXL1Q9H2W2 232 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 OR51I1Q9H343 314 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 BOLA2Q9H3K6 86 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 ENY2Q9NPA8 101 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 SS18L2Q9UHA2 77 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 DKKL1Q9UK85 242 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 OR52A1Q9UKL2 312 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 SLC35A3Q9Y2D2 325 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 COQ4Q9Y3A0 265 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 PRELID3BQ9Y3B1 194 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 UFC1Q9Y3C8 167 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 LSM5Q9Y4Y9 91 aaKnown RBP0.62□□□□□ -2.31
CCDC39-206ENST00000489868 HSPB11Q9Y547 144 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM56-RWDD3S4R434 201 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 CCDC144AA2RUR9 1427 aa0.62□□□□□ -2.31
CCDC39-206ENST00000489868 ERCC6Q03468 1493 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 WDR7Q9Y4E6 1490 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 TONSLQ96HA7 1378 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 DCAF1Q9Y4B6 1507 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 UQCRHLA0A096LP55 91 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 EXOC1LA0A1B0GW35 172 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 PQLC2LA1A4F0 135 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 CCDC160A6NGH7 325 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 OR4C46A6NHA9 309 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 FAM25AB3EWG3 89 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 FAM25CB3EWG5 89 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 FAM25GB3EWG6 89 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 C5orf58C9J3I9 102 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 K7EP13 123 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 SULT1C4O75897 302 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 OR2J2O76002 312 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 OR7C1O76099 320 aaPredicted RBP0.61□□□□□ -2.31
CCDC39-206ENST00000489868 APOMO95445 188 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 UQCRHP07919 91 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 RBP1P09455 135 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 SMIM6P0DI80 62 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 SULT1A3P0DMM9 295 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 SULT1A4P0DMN0 295 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 CD79AP11912 226 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 HIST1H1TP22492 207 aaPredicted RBP0.61□□□□□ -2.31
CCDC39-206ENST00000489868 ERP29P30040 261 aaKnown RBP0.61□□□□□ -2.31
CCDC39-206ENST00000489868 RAB13P51153 203 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 RAB5BP61020 215 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 NAA20P61599 178 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 RHOBP62745 196 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 RPL30P62888 115 aaKnown RBP0.61□□□□□ -2.31
CCDC39-206ENST00000489868 HIST1H3AP68431 136 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 H3F3AP84243 136 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 AKR1C1Q04828 323 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM128Q5BJH2 165 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 FAM78BQ5VT40 261 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 SAMD13Q5VXD3 122 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 LPCAT3Q6P1A2 487 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms