RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 COL7A1Q02388 2944 aa14.39□□□□□ -0.11
EPHB4-207ENST00000489808 IGHV3OR16-8A0A075B7F1 116 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 TRAV25A0A0B4J276 109 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 DUXBA0A1W2PPF3 345 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 C15orf62A8K5M9 175 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 CENPXA8MT69 81 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 NDUFB6O95139 128 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 NXPH3O95157 252 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 CD81P60033 236 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 TNFRSF9Q07011 255 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 C2orf83Q53S99 150 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 NEURL2Q9BR09 285 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 C7orf50Q9BRJ6 194 aaKnown RBP14.38□□□□□ -0.11
EPHB4-207ENST00000489808 HIPK2Q9H2X6 1198 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 HSPB7Q9UBY9 170 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 U3KQK5 164 aa14.38□□□□□ -0.11
EPHB4-207ENST00000489808 YIF1AO95070 293 aa14.37□□□□□ -0.11
EPHB4-207ENST00000489808 CD7P09564 240 aa14.37□□□□□ -0.11
EPHB4-207ENST00000489808 OPRK1P41145 380 aa14.37□□□□□ -0.11
EPHB4-207ENST00000489808 UBE2MP61081 183 aaKnown RBP14.37□□□□□ -0.11
EPHB4-207ENST00000489808 RBPMS2Q6ZRY4 209 aaKnown RBP14.37□□□□□ -0.11
EPHB4-207ENST00000489808 OR4X1Q8NH49 305 aa14.37□□□□□ -0.11
EPHB4-207ENST00000489808 OR10C1Q96KK4 312 aa14.37□□□□□ -0.11
EPHB4-207ENST00000489808 TUBA4BQ9H853 241 aa14.37□□□□□ -0.11
EPHB4-207ENST00000489808 MRPL36Q9P0J6 103 aaKnown RBP14.37□□□□□ -0.11
EPHB4-207ENST00000489808 FLVCR2Q9UPI3 526 aa14.37□□□□□ -0.11
EPHB4-207ENST00000489808 A6NHS1 94 aa14.36□□□□□ -0.11
EPHB4-207ENST00000489808 ZNF207O43670 478 aaKnown RBP14.36□□□□□ -0.11
EPHB4-207ENST00000489808 PITX3O75364 302 aa14.36□□□□□ -0.11
EPHB4-207ENST00000489808 SCAF4O95104 1147 aaKnown RBP14.36□□□□□ -0.11
EPHB4-207ENST00000489808 SLC24A4Q8NFF2 622 aa14.36□□□□□ -0.11
EPHB4-207ENST00000489808 RNASEH2CQ8TDP1 164 aaKnown RBP14.36□□□□□ -0.11
EPHB4-207ENST00000489808 TMEM170AQ8WVE7 144 aa14.36□□□□□ -0.11
EPHB4-207ENST00000489808 RBKSQ9H477 322 aa14.36□□□□□ -0.11
EPHB4-207ENST00000489808 SMPXQ9UHP9 88 aa14.36□□□□□ -0.11
EPHB4-207ENST00000489808 RPS10-NUDT3A0A1W2PQS6 291 aa14.35□□□□□ -0.11
EPHB4-207ENST00000489808 PLA2G10O15496 165 aa14.35□□□□□ -0.11
EPHB4-207ENST00000489808 CLN5O75503 358 aa14.35□□□□□ -0.11
EPHB4-207ENST00000489808 SLC25A6P12236 298 aa14.35□□□□□ -0.11
EPHB4-207ENST00000489808 BTCP35070 178 aa14.35□□□□□ -0.11
EPHB4-207ENST00000489808 TOMM20LQ6UXN7 152 aa14.35□□□□□ -0.11
EPHB4-207ENST00000489808 NOXA1Q86UR1 476 aa14.35□□□□□ -0.11
EPHB4-207ENST00000489808 OR1S1Q8NH92 325 aa14.35□□□□□ -0.11
EPHB4-207ENST00000489808 TMED3Q9Y3Q3 217 aa14.35□□□□□ -0.11
EPHB4-207ENST00000489808 U3KQ87 197 aa14.35□□□□□ -0.11
EPHB4-207ENST00000489808 C9orf170A2RU37 121 aa14.34□□□□□ -0.11
EPHB4-207ENST00000489808 OR11H12B2RN74 326 aa14.34□□□□□ -0.11
EPHB4-207ENST00000489808 LAMTOR1Q6IAA8 161 aa14.34□□□□□ -0.11
EPHB4-207ENST00000489808 ZNF600Q6ZNG1 722 aa14.34□□□□□ -0.11
EPHB4-207ENST00000489808 LINC00299Q6ZSB3 139 aa14.34□□□□□ -0.11
EPHB4-207ENST00000489808 DTD1Q8TEA8 209 aa14.34□□□□□ -0.11
EPHB4-207ENST00000489808 TRAV14DV4A0A0A6YYC5 116 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 IGHV7-4-1A0A0J9YVY3 117 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 TSPAN4O14817 238 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 IFNA10P01566 189 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 NPY1RP25929 384 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 CNPY1Q3B7I2 92 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 SLC16A13Q7RTY0 426 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 DEFB125Q8N687 156 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 TMEM116Q8NCL8 245 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 OR52B4Q8NGK2 314 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 RHPN1-AS1Q9BWJ2 59 aa14.33□□□□□ -0.12
EPHB4-207ENST00000489808 PUS1Q9Y606 427 aaKnown RBP eCLIP14.33□□□□□ -0.12
EPHB4-207ENST00000489808 CHEK1O14757 476 aa14.32□□□□□ -0.12
EPHB4-207ENST00000489808 HOXB5P09067 269 aa14.32□□□□□ -0.12
EPHB4-207ENST00000489808 SLC25A4P12235 298 aa14.32□□□□□ -0.12
EPHB4-207ENST00000489808 ATP5IP56385 69 aaPredicted RBP14.32□□□□□ -0.12
EPHB4-207ENST00000489808 HAGHQ16775 308 aa14.32□□□□□ -0.12
EPHB4-207ENST00000489808 PRSS54Q6PEW0 395 aa14.32□□□□□ -0.12
EPHB4-207ENST00000489808 LINC00322Q6ZN03 302 aaPredicted RBP14.32□□□□□ -0.12
EPHB4-207ENST00000489808 WWC2-AS2Q96NR7 200 aa14.32□□□□□ -0.12
EPHB4-207ENST00000489808 TM2D3Q9BRN9 247 aa14.32□□□□□ -0.12
EPHB4-207ENST00000489808 ZMAT4Q9H898 229 aa14.32□□□□□ -0.12
EPHB4-207ENST00000489808 TRAV30A0A087WSZ9 112 aa14.31□□□□□ -0.12
EPHB4-207ENST00000489808 IGKV1-17P01599 117 aa14.31□□□□□ -0.12
EPHB4-207ENST00000489808 OR4E1P0C645 316 aa14.31□□□□□ -0.12
EPHB4-207ENST00000489808 ANXA7P20073 488 aaKnown RBP14.31□□□□□ -0.12
EPHB4-207ENST00000489808 GGNBP1Q5YKI7 109 aa14.31□□□□□ -0.12
EPHB4-207ENST00000489808 ETFRF1Q6IPR1 90 aa14.31□□□□□ -0.12
EPHB4-207ENST00000489808 SPAG8Q99932 426 aaPredicted RBP14.31□□□□□ -0.12
EPHB4-207ENST00000489808 GINS3Q9BRX5 216 aa14.31□□□□□ -0.12
EPHB4-207ENST00000489808 CCDC32Q9BV29 185 aa14.31□□□□□ -0.12
EPHB4-207ENST00000489808 WFDC10AQ9H1F0 79 aa14.31□□□□□ -0.12
EPHB4-207ENST00000489808 IGHV3-49A0A0A0MS15 119 aa14.3□□□□□ -0.12
EPHB4-207ENST00000489808 FAM90A26D6RGX4 464 aa14.3□□□□□ -0.12
EPHB4-207ENST00000489808 LYRM1O43325 122 aa14.3□□□□□ -0.12
EPHB4-207ENST00000489808 SCGB2A1O75556 95 aa14.3□□□□□ -0.12
EPHB4-207ENST00000489808 DHRS2Q13268 280 aa14.3□□□□□ -0.12
EPHB4-207ENST00000489808 TIGITQ495A1 244 aa14.3□□□□□ -0.12
EPHB4-207ENST00000489808 LYG2Q86SG7 212 aa14.3□□□□□ -0.12
EPHB4-207ENST00000489808 RCHY1Q96PM5 261 aa14.3□□□□□ -0.12
EPHB4-207ENST00000489808 RNF2Q99496 336 aa14.3□□□□□ -0.12
EPHB4-207ENST00000489808 ZFAND3Q9H8U3 227 aa14.3□□□□□ -0.12
EPHB4-207ENST00000489808 RBMY1BA6NDE4 496 aaKnown RBP14.29□□□□□ -0.12
EPHB4-207ENST00000489808 RBMY1EA6NEQ0 496 aaKnown RBP14.29□□□□□ -0.12
EPHB4-207ENST00000489808 RBMY1DP0C7P1 496 aaKnown RBP14.29□□□□□ -0.12
EPHB4-207ENST00000489808 RND2P52198 227 aa14.29□□□□□ -0.12
EPHB4-207ENST00000489808 C4orf46Q504U0 113 aa14.29□□□□□ -0.12
EPHB4-207ENST00000489808 OR1S2Q8NGQ3 325 aa14.29□□□□□ -0.12
EPHB4-207ENST00000489808 COQ8AQ8NI60 647 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms