RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 TMEM231Q9H6L2 316 aa14.27□□□□□ -0.12
CD40-206ENST00000489304 TREM1Q9NP99 234 aa14.27□□□□□ -0.12
CD40-206ENST00000489304 TMEM218A2RU14 115 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 MAP1LC3B2A6NCE7 125 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 NPIPB5A8MRT5 1133 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 LINC00869P0C866 280 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 B2MP61769 119 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 ASPHD1Q5U4P2 390 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 FAM122CQ6P4D5 195 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 LCN15Q6UWW0 184 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 STPG3Q8N7X2 389 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 SSX3Q99909 188 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 MAP1LC3BQ9GZQ8 125 aa14.27□□□□□ -0.13
CD40-206ENST00000489304 CSPG4Q6UVK1 2322 aa14.26□□□□□ -0.13
CD40-206ENST00000489304 EGR2P11161 476 aaPredicted RBP14.26□□□□□ -0.13
CD40-206ENST00000489304 OR10J1P30954 320 aa14.26□□□□□ -0.13
CD40-206ENST00000489304 KRTAP1-1Q07627 177 aa14.26□□□□□ -0.13
CD40-206ENST00000489304 PEA15Q15121 130 aa14.26□□□□□ -0.13
CD40-206ENST00000489304 TTC9CQ8N5M4 171 aa14.26□□□□□ -0.13
CD40-206ENST00000489304 NPIPB3Q92617 1050 aa14.26□□□□□ -0.13
CD40-206ENST00000489304 NARS2Q96I59 477 aaKnown RBP14.26□□□□□ -0.13
CD40-206ENST00000489304 SLC25A33Q9BSK2 321 aa14.26□□□□□ -0.13
CD40-206ENST00000489304 MRPL36Q9P0J6 103 aaKnown RBP14.26□□□□□ -0.13
CD40-206ENST00000489304 PMS2P11Q13670 270 aa14.25□□□□□ -0.13
CD40-206ENST00000489304 GCSAMLQ5JQS6 135 aa14.25□□□□□ -0.13
CD40-206ENST00000489304 TMEM219Q86XT9 240 aa14.25□□□□□ -0.13
CD40-206ENST00000489304 C5orf56Q8N8D9 126 aa14.25□□□□□ -0.13
CD40-206ENST00000489304 TMEM116Q8NCL8 245 aa14.25□□□□□ -0.13
CD40-206ENST00000489304 RAB24Q969Q5 203 aa14.25□□□□□ -0.13
CD40-206ENST00000489304 SLC25A22Q9H936 323 aa14.25□□□□□ -0.13
CD40-206ENST00000489304 MOB4Q9Y3A3 225 aa14.25□□□□□ -0.13
CD40-206ENST00000489304 AKAP9Q99996 3911 aa14.25□□□□□ -0.13
CD40-206ENST00000489304 ITPR3Q14573 2671 aa14.25□□□□□ -0.13
CD40-206ENST00000489304 RBFOX3A6NFN3 312 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 I3L2K1 104 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 MT-CO2P00403 227 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 DEFA4P12838 97 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 CDC34P49427 236 aaPredicted RBP14.24□□□□□ -0.13
CD40-206ENST00000489304 RND2P52198 227 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 DEFB112Q30KQ8 113 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 HSPB9Q9BQS6 159 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 EIF5A2Q9GZV4 153 aaKnown RBP14.24□□□□□ -0.13
CD40-206ENST00000489304 SMDT1Q9H4I9 107 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 ITPR2Q14571 2701 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 CELSR1Q9NYQ6 3014 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 IGKV1D-37A0A075B6S9 117 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 SH2D7A6NKC9 451 aaPredicted RBP14.24□□□□□ -0.13
CD40-206ENST00000489304 C9JQL5 133 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 IGHV3-48P01763 117 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 FGF8P55075 233 aaPredicted RBP14.24□□□□□ -0.13
CD40-206ENST00000489304 LY6EQ16553 131 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 CYP2G1PQ6ZSU1 146 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 IL17RELQ6ZVW7 336 aa14.24□□□□□ -0.13
CD40-206ENST00000489304 A6NDX4 124 aa14.23□□□□□ -0.13
CD40-206ENST00000489304 ZNF506Q5JVG8 444 aa14.23□□□□□ -0.13
CD40-206ENST00000489304 C10orf91Q5T1B1 145 aa14.23□□□□□ -0.13
CD40-206ENST00000489304 SGMS2Q8NHU3 365 aa14.23□□□□□ -0.13
CD40-206ENST00000489304 NANPQ8TBE9 248 aa14.23□□□□□ -0.13
CD40-206ENST00000489304 A0A1W2PPV4 95 aa14.22□□□□□ -0.13
CD40-206ENST00000489304 TCRBV4S1A1TA0A5B7 111 aa14.22□□□□□ -0.13
CD40-206ENST00000489304 H3BUX3 64 aa14.22□□□□□ -0.13
CD40-206ENST00000489304 TEX15Q9BXT5 2789 aa14.22□□□□□ -0.13
CD40-206ENST00000489304 ZNF469Q96JG9 3925 aaPredicted RBP14.21□□□□□ -0.13
CD40-206ENST00000489304 IGLV11-55A0A075B6I3 123 aa14.21□□□□□ -0.13
CD40-206ENST00000489304 K7EIM0 57 aa14.21□□□□□ -0.13
CD40-206ENST00000489304 EIF3GO75821 320 aaKnown RBP eCLIP14.21□□□□□ -0.13
CD40-206ENST00000489304 AMY1AP04745 511 aa14.21□□□□□ -0.13
CD40-206ENST00000489304 SELENOTP62341 195 aa14.21□□□□□ -0.13
CD40-206ENST00000489304 FANCD2OSQ96PS1 177 aa14.21□□□□□ -0.13
CD40-206ENST00000489304 TRGV9Q99603 122 aa14.21□□□□□ -0.13
CD40-206ENST00000489304 RARRES2Q99969 163 aa14.21□□□□□ -0.13
CD40-206ENST00000489304 CCDC168Q8NDH2 2452 aa14.21□□□□□ -0.14
CD40-206ENST00000489304 ZFP92A6NM28 416 aa14.21□□□□□ -0.14
CD40-206ENST00000489304 HMGB3O15347 200 aaKnown RBP14.21□□□□□ -0.14
CD40-206ENST00000489304 SFTA3P0C7M3 94 aa14.21□□□□□ -0.14
CD40-206ENST00000489304 ADCYAP1P18509 176 aa14.21□□□□□ -0.14
CD40-206ENST00000489304 GATA2P23769 480 aaPredicted RBP14.21□□□□□ -0.14
CD40-206ENST00000489304 RHOBP62745 196 aa14.21□□□□□ -0.14
CD40-206ENST00000489304 HAGHQ16775 308 aa14.21□□□□□ -0.14
CD40-206ENST00000489304 ZNF48Q96MX3 618 aaPredicted RBP14.21□□□□□ -0.14
CD40-206ENST00000489304 C19orf24Q9BVV8 132 aa14.21□□□□□ -0.14
CD40-206ENST00000489304 SEC11CQ9BY50 192 aa14.21□□□□□ -0.14
CD40-206ENST00000489304 GNG13Q9P2W3 67 aa14.21□□□□□ -0.14
CD40-206ENST00000489304 PITPNC1Q9UKF7 332 aa14.21□□□□□ -0.14
CD40-206ENST00000489304 CARHSP1Q9Y2V2 147 aaKnown RBP14.21□□□□□ -0.14
CD40-206ENST00000489304 IGHV3-21A0A0B4J1V1 117 aa14.2□□□□□ -0.14
CD40-206ENST00000489304 LOC102723971A0A1B0GUV8 181 aa14.2□□□□□ -0.14
CD40-206ENST00000489304 ICAM4Q14773 271 aa14.2□□□□□ -0.14
CD40-206ENST00000489304 KLK9Q2XQG4 91 aa14.2□□□□□ -0.14
CD40-206ENST00000489304 KHDC3LQ587J8 217 aa14.2□□□□□ -0.14
CD40-206ENST00000489304 C9orf139Q6ZV77 190 aa14.2□□□□□ -0.14
CD40-206ENST00000489304 OR4X1Q8NH49 305 aa14.2□□□□□ -0.14
CD40-206ENST00000489304 TMEM68Q96MH6 324 aa14.2□□□□□ -0.14
CD40-206ENST00000489304 TNFRSF19Q9NS68 423 aa14.2□□□□□ -0.14
CD40-206ENST00000489304 KLK9Q9UKQ9 250 aa14.2□□□□□ -0.14
CD40-206ENST00000489304 F8W036 122 aa14.19□□□□□ -0.14
CD40-206ENST00000489304 ATP6V0E1O15342 81 aa14.19□□□□□ -0.14
CD40-206ENST00000489304 IFNA1P01562 189 aa14.19□□□□□ -0.14
CD40-206ENST00000489304 STAG3L2P0CL84 134 aa14.19□□□□□ -0.14
CD40-206ENST00000489304 STAG3L3P0CL85 134 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms