RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 SHPKQ9UHJ6 478 aa10.17□□□□□ -0.78
LMO4-203ENST00000489303 RPS10-NUDT3A0A1W2PQS6 291 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 OR11H12B2RN74 326 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 IGHV3-48P01763 117 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 CD7P09564 240 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 BMI1P35226 326 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 OPRK1P41145 380 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 CCR6P51684 374 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 TMEM128Q5BJH2 165 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 NOXA1Q86UR1 476 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 GINS3Q9BRX5 216 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 SRRQ9GZT4 340 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 SELENOKQ9Y6D0 94 aa10.16□□□□□ -0.78
LMO4-203ENST00000489303 TENM2Q9NT68 2774 aa10.15□□□□□ -0.78
LMO4-203ENST00000489303 IGHV3OR16-8A0A075B7F1 116 aa10.15□□□□□ -0.78
LMO4-203ENST00000489303 NAP1L6A6NFF2 107 aa10.15□□□□□ -0.78
LMO4-203ENST00000489303 ZNF207O43670 478 aaKnown RBP10.15□□□□□ -0.78
LMO4-203ENST00000489303 VAMP1P23763 118 aa10.15□□□□□ -0.78
LMO4-203ENST00000489303 SMCO1Q147U7 214 aa10.15□□□□□ -0.78
LMO4-203ENST00000489303 DEFB125Q8N687 156 aa10.15□□□□□ -0.78
LMO4-203ENST00000489303 SPAG8Q99932 426 aaPredicted RBP10.15□□□□□ -0.78
LMO4-203ENST00000489303 SPATA25Q9BR10 227 aa10.15□□□□□ -0.78
LMO4-203ENST00000489303 PRR13Q9NZ81 148 aa10.15□□□□□ -0.78
LMO4-203ENST00000489303 TRAV14DV4A0A0A6YYC5 116 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 DUXBA0A1W2PPF3 345 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 CENPXA8MT69 81 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 SUPT4H1P63272 117 aaKnown RBP10.14□□□□□ -0.79
LMO4-203ENST00000489303 RBMS2Q15434 407 aaKnown RBP10.14□□□□□ -0.79
LMO4-203ENST00000489303 HAGHQ16775 308 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 PVRIGQ6DKI7 326 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 ZNF600Q6ZNG1 722 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 LYZL2Q7Z4W2 148 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 CENPSQ8N2Z9 138 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 TMEM116Q8NCL8 245 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 SLC24A4Q8NFF2 622 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 OR1S1Q8NH92 325 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 TM2D3Q9BRN9 247 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 SRD5A3Q9H8P0 318 aa10.14□□□□□ -0.79
LMO4-203ENST00000489303 TRAV30A0A087WSZ9 112 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 IGHV7-4-1A0A0J9YVY3 117 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 A0A1B0GU03 582 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 TSPAN4O14817 238 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 CLN5O75503 358 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 NXPH3O95157 252 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 TMEM50AO95807 157 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 BSXQ3C1V8 233 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 C2orf83Q53S99 150 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 ETFRF1Q6IPR1 90 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 OR4X1Q8NH49 305 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 RNASEH2CQ8TDP1 164 aaKnown RBP10.13□□□□□ -0.79
LMO4-203ENST00000489303 OR10C1Q96KK4 312 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 SMPXQ9UHP9 88 aa10.13□□□□□ -0.79
LMO4-203ENST00000489303 OR4C46A6NHA9 309 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 C3orf84H3BNL1 204 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 IFNA10P01566 189 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 CD5P06127 495 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 SLC25A4P12235 298 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 NPY1RP25929 384 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 TNFRSF9Q07011 255 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 NMSQ5H8A3 153 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 TOMM20LQ6UXN7 152 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 MUC7Q8TAX7 377 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 DTD1Q8TEA8 209 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 RHPN1-AS1Q9BWJ2 59 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 HSPB7Q9UBY9 170 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 PUS1Q9Y606 427 aaKnown RBP eCLIP10.12□□□□□ -0.79
LMO4-203ENST00000489303 U3KQ87 197 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 STARD9Q9P2P6 4700 aa10.12□□□□□ -0.79
LMO4-203ENST00000489303 DNAH1Q9P2D7 4330 aa10.11□□□□□ -0.79
LMO4-203ENST00000489303 CHEK1O14757 476 aa10.11□□□□□ -0.79
LMO4-203ENST00000489303 SFT2D2O95562 160 aa10.11□□□□□ -0.79
LMO4-203ENST00000489303 ATP5IP56385 69 aaPredicted RBP10.11□□□□□ -0.79
LMO4-203ENST00000489303 UBE2MP61081 183 aaKnown RBP10.11□□□□□ -0.79
LMO4-203ENST00000489303 BAK1Q16611 211 aa10.11□□□□□ -0.79
LMO4-203ENST00000489303 LRTM2Q8N967 370 aa10.11□□□□□ -0.79
LMO4-203ENST00000489303 NARS2Q96I59 477 aaKnown RBP10.11□□□□□ -0.79
LMO4-203ENST00000489303 C7orf50Q9BRJ6 194 aaKnown RBP10.11□□□□□ -0.79
LMO4-203ENST00000489303 WFDC10AQ9H1F0 79 aa10.11□□□□□ -0.79
LMO4-203ENST00000489303 FNDC4Q9H6D8 234 aaPredicted RBP10.11□□□□□ -0.79
LMO4-203ENST00000489303 TMEM231Q9H6L2 316 aa10.11□□□□□ -0.79
LMO4-203ENST00000489303 EPPK1P58107 5090 aaKnown RBP10.11□□□□□ -0.79
LMO4-203ENST00000489303 IGHV3-49A0A0A0MS15 119 aa10.1□□□□□ -0.79
LMO4-203ENST00000489303 LINC00854A0A1B0GVQ3 168 aa10.1□□□□□ -0.79
LMO4-203ENST00000489303 NPPCP23582 126 aa10.1□□□□□ -0.79
LMO4-203ENST00000489303 CMC4P56277 68 aaPredicted RBP10.1□□□□□ -0.79
LMO4-203ENST00000489303 PAFAH1B2P68402 229 aa10.1□□□□□ -0.79
LMO4-203ENST00000489303 PPP1R1AQ13522 171 aa10.1□□□□□ -0.79
LMO4-203ENST00000489303 MLANAQ16655 118 aa10.1□□□□□ -0.79
LMO4-203ENST00000489303 LINC00322Q6ZN03 302 aaPredicted RBP10.1□□□□□ -0.79
LMO4-203ENST00000489303 RNF2Q99496 336 aa10.1□□□□□ -0.79
LMO4-203ENST00000489303 RBKSQ9H477 322 aa10.1□□□□□ -0.79
LMO4-203ENST00000489303 TMED3Q9Y3Q3 217 aa10.1□□□□□ -0.79
LMO4-203ENST00000489303 CSMD3Q7Z407 3707 aa10.09□□□□□ -0.79
LMO4-203ENST00000489303 LOC102724200A0A096LPH7 203 aaPredicted RBP10.09□□□□□ -0.79
LMO4-203ENST00000489303 A0A1W2PS18 150 aa10.09□□□□□ -0.79
LMO4-203ENST00000489303 MED6O75586 246 aa10.09□□□□□ -0.79
LMO4-203ENST00000489303 NDUFB6O95139 128 aa10.09□□□□□ -0.79
LMO4-203ENST00000489303 IFNA4P05014 189 aa10.09□□□□□ -0.79
LMO4-203ENST00000489303 SLC25A6P12236 298 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms