RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 PFDN2Q9UHV9 154 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 DMRT1Q9Y5R6 373 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 RFNGQ9Y644 331 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 PXMP4Q9Y6I8 212 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 ZANQ9Y493 2812 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 NBPF19A0A087WUL8 3843 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 LINC01548A6NM66 108 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 I3L2K1 104 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 K7EIM0 57 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 OR2J3O76001 311 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 FABP1P07148 127 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 FAM157CP0CG43 387 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 OR10J1P30954 320 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 B2MP61769 119 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 RHOGP84095 191 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 ACOT6Q3I5F7 207 aaPredicted RBP7.87□□□□□ -1.15
USP11-211ENST00000489111 PXDC1Q5TGL8 231 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 CENPVQ7Z7K6 275 aaPredicted RBP7.87□□□□□ -1.15
USP11-211ENST00000489111 STPG3Q8N7X2 389 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 TMEM116Q8NCL8 245 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 CXorf58Q96LI9 332 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 FANCD2OSQ96PS1 177 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 DUX5Q96PT3 197 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 FBXL7Q9UJT9 491 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 CSMD1Q96PZ7 3565 aa7.87□□□□□ -1.15
USP11-211ENST00000489111 TCRBV4S1A1TA0A5B7 111 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 DNAJC9-AS1A6NH13 148 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 TEX46H3BTG2 121 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 M6PRP20645 277 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 RPL29P47914 159 aaKnown RBP7.86□□□□□ -1.15
USP11-211ENST00000489111 NPBWR1P48145 328 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 FHITP49789 147 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 RAB2AP61019 212 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 SELENOTP62341 195 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 Q56UQ5 140 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 MIC13Q5XKP0 118 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 CYP2G1PQ6ZSU1 146 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 COMMD7Q86VX2 200 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 THAP8Q8NA92 274 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 NECAP1Q8NC96 275 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 OR10G4Q8NGN3 311 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 OR10G9Q8NGN4 311 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 OR10G7Q8NGN6 311 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 OR4X1Q8NH49 305 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 ZNF418Q8TF45 676 aaPredicted RBP7.86□□□□□ -1.15
USP11-211ENST00000489111 HRH4Q9H3N8 390 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 SLC39A9Q9NUM3 307 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 C21orf62Q9NYP8 219 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 PLA2G2EQ9NZK7 142 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 LINC00527Q9UJ94 153 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 ZNF580Q9UK33 172 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 SLC45A2Q9UMX9 530 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 VPS13CQ709C8 3753 aa7.86□□□□□ -1.15
USP11-211ENST00000489111 IGKV1OR2-108A0A075B7D4 117 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 LINC00862A6NCI5 91 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 FAM223BA6NKX1 122 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 H3BUA1 57 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 GNG7O60262 68 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 NDUFB8O95169 186 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 H2AFB1P0C5Y9 115 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 MFAP4P55083 255 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 C15orf32Q32M92 178 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 C19orf54Q5BKX5 351 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 FAM122CQ6P4D5 195 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 FAM223AQ8IWN6 122 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 BPIFCQ8NFQ6 507 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 VN1R17PQ8TDU5 208 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 NOL4LQ96MY1 436 aaPredicted RBP7.85□□□□□ -1.15
USP11-211ENST00000489111 MS4A10Q96PG2 267 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 TRGV9Q99603 122 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 ACTR3CQ9C0K3 210 aaPredicted RBP7.85□□□□□ -1.15
USP11-211ENST00000489111 RPRMQ9NS64 109 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 MRPL36Q9P0J6 103 aaKnown RBP7.85□□□□□ -1.15
USP11-211ENST00000489111 OTOGQ6ZRI0 2925 aa7.85□□□□□ -1.15
USP11-211ENST00000489111 ABCA1O95477 2261 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 TRAV30A0A087WSZ9 112 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 TRBV9A0A0B4J1U6 114 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 MFSD2BA6NFX1 497 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 COX7A2P2O60397 106 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 CLN5O75503 358 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 HBE1P02100 147 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 TRGV3P03979 118 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 LINC00869P0C866 280 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 PF4V1P10720 104 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 CDC34P49427 236 aaPredicted RBP7.84□□□□□ -1.15
USP11-211ENST00000489111 TPPP2P59282 170 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 PRR20EP86478 221 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 PRR20CP86479 221 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 PRR20DP86480 221 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 PRR20BP86481 221 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 PRR20AP86496 221 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 DEFA5Q01523 94 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 ATP5G2Q06055 141 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 TMEM95Q3KNT9 176 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 Q6ZS46 218 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 SLC7A5P1Q8MH63 180 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 SFT2D1Q8WV19 159 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 EEF1AKMT3Q96AZ1 226 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 RCC1LQ96I51 464 aaKnown RBP7.84□□□□□ -1.15
USP11-211ENST00000489111 VSIRQ9H7M9 311 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms